Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
UBL4AP11441 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
UBL4AP11441 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 Y_RNA.242-201ENST00000364473 110 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 RNU6-662P-201ENST00000384253 104 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 MIR15B-201ENST00000385045 98 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 MIR802-201ENST00000390235 94 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 MIR1278-201ENST00000408753 81 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 RNU6-1054P-201ENST00000411293 104 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 AC023449.1-201ENST00000454464 154 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 MTATP8P1-201ENST00000467115 207 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 TRBVB-201ENST00000477100 408 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 SCARNA24.2-201ENST00000516968 130 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 DEFB108E-201ENST00000524692 240 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.36□□□□□ -2.19
UBL4AP11441 AC008737.2-201ENST00000599446 118 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
UBL4AP11441 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBL4AP11441 RNU6-238P-201ENST00000363313 106 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 Y_RNA.217-201ENST00000364214 105 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 Y_RNA.376-201ENST00000365638 108 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 RNU6-442P-201ENST00000383968 104 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 MIR764-201ENST00000390811 85 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 BTF3P11-201ENST00000426582 477 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
UBL4AP11441 Y_RNA.641-201ENST00000459414 105 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 NDUFA4P2-201ENST00000489989 244 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.35□□□□□ -2.19
UBL4AP11441 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UBL4AP11441 snoU18.1-201ENST00000629629 71 ntBASIC1.35□□□□□ -2.19
UBL4AP11441 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 RNA5SP496-201ENST00000391240 109 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 MIR1302-6-201ENST00000408466 90 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 snoU13.23-201ENST00000458863 104 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.34□□□□□ -2.19
UBL4AP11441 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.34□□□□□ -2.19
UBL4AP11441 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 MIR7843-201ENST00000622274 79 ntBASIC1.34□□□□□ -2.19
UBL4AP11441 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 Y_RNA.14-201ENST00000362415 103 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 Y_RNA.176-201ENST00000363815 109 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 Y_RNA.293-201ENST00000364908 93 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 RNU6-738P-201ENST00000384531 106 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 SNORD11-201ENST00000459124 84 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 AC108210.2-201ENST00000503681 201 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.33□□□□□ -2.2
UBL4AP11441 AC008507.4-201ENST00000585464 127 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 MIR8062-201ENST00000621515 85 ntBASIC1.33□□□□□ -2.2
UBL4AP11441 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 Y_RNA.512-201ENST00000384518 102 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 Y_RNA.574-201ENST00000384766 95 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 MIR4724-201ENST00000579485 89 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 MIR5688-201ENST00000580619 83 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 AP001282.2-201ENST00000616149 309 ntBASIC1.32□□□□□ -2.2
UBL4AP11441 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UBL4AP11441 MIR335-201ENST00000362173 94 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 MIR367-201ENST00000362299 68 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 Y_RNA.237-201ENST00000364439 102 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 Y_RNA.275-201ENST00000364726 110 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 MIR548F4-201ENST00000408515 105 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 AL133373.1-201ENST00000497098 94 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.31□□□□□ -2.2
UBL4AP11441 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.31□□□□□ -2.2
UBL4AP11441 AL117187.1-201ENST00000555482 181 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 MIR4298-201ENST00000584380 73 ntBASIC1.31□□□□□ -2.2
UBL4AP11441 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBL4AP11441 AL442644.1-201ENST00000454390 3105 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 Y_RNA.44-201ENST00000362676 108 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 Y_RNA.459-201ENST00000384251 102 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 RNU6-1289P-201ENST00000384431 106 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 MIR520C-201ENST00000385005 87 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 RNU6-383P-201ENST00000410864 94 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 SNRPGP14-201ENST00000435400 219 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.3□□□□□ -2.2
UBL4AP11441 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 MIR4719-201ENST00000585233 84 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 AL008718.3-201ENST00000610217 321 ntBASIC1.3□□□□□ -2.2
UBL4AP11441 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UBL4AP11441 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms