Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MIR4659A-201ENST00000580269 81 ntBASIC0.41□□□□□ -2.34
CD28P10747 AC010205.1-201ENST00000616668 449 ntBASIC0.41□□□□□ -2.34
CD28P10747 U2.1-201ENST00000618978 145 ntBASIC0.41□□□□□ -2.34
CD28P10747 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
CD28P10747 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
CD28P10747 SNORD113.3-201ENST00000364630 78 ntBASIC0.4□□□□□ -2.35
CD28P10747 Y_RNA.456-201ENST00000384232 111 ntBASIC0.4□□□□□ -2.35
CD28P10747 RNU6-1067P-201ENST00000384752 107 ntBASIC0.4□□□□□ -2.35
CD28P10747 MIR559-201ENST00000385188 96 ntBASIC0.4□□□□□ -2.35
CD28P10747 RNU6-1304P-201ENST00000411374 106 ntBASIC0.4□□□□□ -2.35
CD28P10747 AL390729.2-201ENST00000416137 156 ntBASIC0.4□□□□□ -2.35
CD28P10747 AC244098.3-201ENST00000424803 96 ntBASIC0.4□□□□□ -2.35
CD28P10747 AC005534.2-201ENST00000431047 433 ntBASIC0.4□□□□□ -2.35
CD28P10747 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.4□□□□□ -2.35
CD28P10747 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.4□□□□□ -2.35
CD28P10747 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
CD28P10747 AL355375.2-201ENST00000574825 175 ntBASIC0.4□□□□□ -2.35
CD28P10747 AP003357.1-201ENST00000604497 148 ntBASIC0.4□□□□□ -2.35
CD28P10747 RNU6-94P-201ENST00000607728 107 ntBASIC0.4□□□□□ -2.35
CD28P10747 AL136317.1-201ENST00000612653 226 ntBASIC0.4□□□□□ -2.35
CD28P10747 AC025253.1-201ENST00000613623 543 ntBASIC0.4□□□□□ -2.35
CD28P10747 MIR4251-201ENST00000635819 61 ntBASIC0.4□□□□□ -2.35
CD28P10747 U6.92-201ENST00000636464 89 ntBASIC0.4□□□□□ -2.35
CD28P10747 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
CD28P10747 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CD28P10747 Y_RNA.160-201ENST00000363677 92 ntBASIC0.39□□□□□ -2.35
CD28P10747 Y_RNA.168-201ENST00000363740 102 ntBASIC0.39□□□□□ -2.35
CD28P10747 RNU6-324P-201ENST00000363957 106 ntBASIC0.39□□□□□ -2.35
CD28P10747 Y_RNA.329-201ENST00000365209 107 ntBASIC0.39□□□□□ -2.35
CD28P10747 AC099799.1-201ENST00000439809 192 ntBASIC0.39□□□□□ -2.35
CD28P10747 MTCO3P10-201ENST00000455912 772 ntBASIC0.39□□□□□ -2.35
CD28P10747 AC091951.2-201ENST00000500762 203 ntBASIC0.39□□□□□ -2.35
CD28P10747 MIR548AR-201ENST00000582191 57 ntBASIC0.39□□□□□ -2.35
CD28P10747 AC092794.1-201ENST00000612734 582 ntBASIC0.39□□□□□ -2.35
CD28P10747 AC011476.5-201ENST00000615594 130 ntBASIC0.39□□□□□ -2.35
CD28P10747 AC091925.1-201ENST00000623204 462 ntBASIC0.39□□□□□ -2.35
CD28P10747 Y_RNA.203-201ENST00000364106 102 ntBASIC0.38□□□□□ -2.35
CD28P10747 RNY3P11-201ENST00000364153 102 ntBASIC0.38□□□□□ -2.35
CD28P10747 RNU6-654P-201ENST00000364373 107 ntBASIC0.38□□□□□ -2.35
CD28P10747 MT-TL1-201ENST00000386347 75 ntBASIC0.38□□□□□ -2.35
CD28P10747 SNORD28B-201ENST00000390993 75 ntBASIC0.38□□□□□ -2.35
CD28P10747 RNU1-119P-201ENST00000391122 165 ntBASIC0.38□□□□□ -2.35
CD28P10747 MLLT10P1-201ENST00000418346 262 ntBASIC0.38□□□□□ -2.35
CD28P10747 AF228730.4-201ENST00000421457 183 ntBASIC0.38□□□□□ -2.35
CD28P10747 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
CD28P10747 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
CD28P10747 AC005042.3-201ENST00000453230 174 ntBASIC0.38□□□□□ -2.35
CD28P10747 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
CD28P10747 AC127455.1-201ENST00000565496 145 ntBASIC0.38□□□□□ -2.35
CD28P10747 7SK.10-201ENST00000621414 298 ntBASIC0.38□□□□□ -2.35
CD28P10747 MIR377-201ENST00000362145 69 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNU6-490P-201ENST00000362985 107 ntBASIC0.37□□□□□ -2.35
CD28P10747 SNORD14E-201ENST00000364009 85 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNU6-580P-201ENST00000365159 107 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNU6-1175P-201ENST00000365200 107 ntBASIC0.37□□□□□ -2.35
CD28P10747 Y_RNA.462-201ENST00000384268 102 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNU6-855P-201ENST00000410395 104 ntBASIC0.37□□□□□ -2.35
CD28P10747 Y_RNA.605-201ENST00000410577 105 ntBASIC0.37□□□□□ -2.35
CD28P10747 MTCO2P27-201ENST00000420740 428 ntBASIC0.37□□□□□ -2.35
CD28P10747 AC067940.1-201ENST00000458411 300 ntBASIC0.37□□□□□ -2.35
CD28P10747 Y_RNA.653-201ENST00000459091 95 ntBASIC0.37□□□□□ -2.35
CD28P10747 NDUFA4P2-201ENST00000489989 244 ntBASIC0.37□□□□□ -2.35
CD28P10747 RNA5SP121-201ENST00000516537 101 ntBASIC0.37□□□□□ -2.35
CD28P10747 MIR5188-201ENST00000583467 113 ntBASIC0.37□□□□□ -2.35
CD28P10747 POLR3GP1-201ENST00000594073 261 ntBASIC0.37□□□□□ -2.35
CD28P10747 VN1R91P-201ENST00000594377 169 ntBASIC0.37□□□□□ -2.35
CD28P10747 AC104695.3-201ENST00000604052 296 ntBASIC0.37□□□□□ -2.35
CD28P10747 AC113139.1-201ENST00000605049 239 ntBASIC0.37□□□□□ -2.35
CD28P10747 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
CD28P10747 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CD28P10747 SNORD81.1-201ENST00000363064 77 ntBASIC0.36□□□□□ -2.35
CD28P10747 Y_RNA.341-201ENST00000365341 102 ntBASIC0.36□□□□□ -2.35
CD28P10747 RNU6-708P-201ENST00000384217 107 ntBASIC0.36□□□□□ -2.35
CD28P10747 SNORD38C-201ENST00000384381 69 ntBASIC0.36□□□□□ -2.35
CD28P10747 Y_RNA.537-201ENST00000384626 109 ntBASIC0.36□□□□□ -2.35
CD28P10747 SNORD105-201ENST00000386910 85 ntBASIC0.36□□□□□ -2.35
CD28P10747 MT-TN-201ENST00000387400 73 ntBASIC0.36□□□□□ -2.35
CD28P10747 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.36□□□□□ -2.35
CD28P10747 RNU7-169P-201ENST00000459456 61 ntBASIC0.36□□□□□ -2.35
CD28P10747 RNU2-13P-201ENST00000515909 113 ntBASIC0.36□□□□□ -2.35
CD28P10747 RNU7-115P-201ENST00000516433 55 ntBASIC0.36□□□□□ -2.35
CD28P10747 MIR2115-201ENST00000516657 100 ntBASIC0.36□□□□□ -2.35
CD28P10747 AC024405.2-202ENST00000532731 184 ntBASIC0.36□□□□□ -2.35
CD28P10747 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.36□□□□□ -2.35
CD28P10747 Pinc.1-201ENST00000616452 154 ntBASIC0.36□□□□□ -2.35
CD28P10747 Y_RNA.148-201ENST00000363557 117 ntBASIC0.35□□□□□ -2.35
CD28P10747 Y_RNA.248-201ENST00000364501 109 ntBASIC0.35□□□□□ -2.35
CD28P10747 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
CD28P10747 RNU6-442P-201ENST00000383968 104 ntBASIC0.35□□□□□ -2.35
CD28P10747 MIR628-201ENST00000385229 95 ntBASIC0.35□□□□□ -2.35
CD28P10747 AL590004.1-201ENST00000405321 300 ntBASIC0.35□□□□□ -2.35
CD28P10747 RNU6-177P-201ENST00000411257 104 ntBASIC0.35□□□□□ -2.35
CD28P10747 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.35□□□□□ -2.35
CD28P10747 HMGN1P10-201ENST00000474557 553 ntBASIC0.35□□□□□ -2.35
CD28P10747 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
CD28P10747 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.35□□□□□ -2.35
CD28P10747 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CD28P10747 AC008507.4-201ENST00000585464 127 ntBASIC0.35□□□□□ -2.35
CD28P10747 AL355073.2-201ENST00000612106 557 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms