Protein–RNA interactions for Protein: P0CW19

LIMS3, LIM and senescent cell antigen-like-containing domain protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3P0CW19 MIR330-201ENST00000362196 94 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 RNY1-201ENST00000364228 113 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 PCNPP3-201ENST00000393579 471 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 MTND2P22-201ENST00000444325 1033 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 AC091959.1-201ENST00000495857 238 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 AC011352.1-201ENST00000512300 793 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.28□□□□□ -2.45
LIMS3P0CW19 AC055872.1-201ENST00000570978 278 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 uc_338.6-201ENST00000613544 171 ntBASIC-0.28□□□□□ -2.45
LIMS3P0CW19 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 RNU6-961P-201ENST00000363893 105 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 AC074085.1-201ENST00000413598 418 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 AC090844.1-201ENST00000422019 156 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 RNU7-185P-201ENST00000459215 60 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.29□□□□□ -2.46
LIMS3P0CW19 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.29□□□□□ -2.46
LIMS3P0CW19 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.29□□□□□ -2.46
LIMS3P0CW19 MIR1273G-201ENST00000577677 100 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 MIR4305-201ENST00000583252 102 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 AC090517.2-201ENST00000614966 680 ntBASIC-0.29□□□□□ -2.46
LIMS3P0CW19 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-514P-201ENST00000384208 107 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 MIR145-201ENST00000384967 88 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-780P-201ENST00000391030 104 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 MTND4LP16-201ENST00000440828 295 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-436P-201ENST00000516171 114 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-469P-201ENST00000516253 101 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-566P-201ENST00000516790 107 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.3□□□□□ -2.46
LIMS3P0CW19 MIR4743-201ENST00000584576 69 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 AC008507.4-201ENST00000585464 127 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 MIR6740-201ENST00000618268 113 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 MIR6755-201ENST00000619993 66 ntBASIC-0.3□□□□□ -2.46
LIMS3P0CW19 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 SNORD38B-201ENST00000384690 67 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-373P-201ENST00000411247 98 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 AL358176.2-201ENST00000425769 204 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 AC107297.1-201ENST00000459991 176 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-848P-201ENST00000515948 107 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-617P-201ENST00000516147 107 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-473P-201ENST00000516164 107 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-155P-201ENST00000516347 100 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 AC011712.1-201ENST00000588959 234 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 POLR3GP1-201ENST00000594073 261 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 AC018462.2-201ENST00000605375 395 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 AC006441.5-201ENST00000612680 209 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.31□□□□□ -2.46
LIMS3P0CW19 MIR8087-201ENST00000612745 78 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 SNORD38B-202ENST00000625943 69 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
LIMS3P0CW19 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 SNORA24-201ENST00000384096 131 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 MIR518F-201ENST00000384973 87 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 RNU6-127P-201ENST00000390897 107 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 RNU6-710P-201ENST00000410424 105 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 AC236972.2-201ENST00000434979 310 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 AC069271.1-201ENST00000445577 156 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 AC005042.3-201ENST00000453230 174 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.32□□□□□ -2.46
LIMS3P0CW19 MIR5188-201ENST00000583467 113 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 AC022306.2-201ENST00000617563 647 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 AC134878.1-201ENST00000619901 243 ntBASIC-0.32□□□□□ -2.46
LIMS3P0CW19 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 RNA5SP325-201ENST00000363756 130 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 RNU6-716P-201ENST00000365621 103 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 MIR892B-201ENST00000401279 77 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 MIR1197-201ENST00000408818 88 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 RNU2-66P-201ENST00000410650 161 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 AL512326.2-201ENST00000426359 151 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.33□□□□□ -2.46
LIMS3P0CW19 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 MIR3611-201ENST00000584484 83 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 AC060780.3-201ENST00000589464 80 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 AC005176.2-201ENST00000596933 147 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 AC090617.10-201ENST00000624308 134 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 MIR1321-201ENST00000637766 79 ntBASIC-0.33□□□□□ -2.46
LIMS3P0CW19 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 MIR593-201ENST00000384856 100 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 MIR588-201ENST00000384900 83 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 SNORA26.5-201ENST00000391215 123 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 AC009161.1-201ENST00000417306 376 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 AC026782.1-201ENST00000512952 449 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 282.3 ms