Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 SNORA53-201ENST00000391141 249 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 RNU2-14P-201ENST00000411053 191 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 RPL21P38-201ENST00000418090 167 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 MTCO1P5-201ENST00000433573 344 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 AC098869.1-201ENST00000481627 292 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 MRPS35P2-201ENST00000508242 191 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 MIR6504-201ENST00000613520 61 ntBASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RAB40ALP0C0E4 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 RNU6-806P-201ENST00000365147 105 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 RNU6-514P-201ENST00000384208 107 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 SNORA26.5-201ENST00000391215 123 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 MTCO2P33-201ENST00000402100 465 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 MIR1298-201ENST00000408783 112 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 RNU6-985P-201ENST00000410182 104 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 SNORA36B-201ENST00000410438 131 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 HMGN2P32-201ENST00000444648 269 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 MTND4LP30-201ENST00000454092 297 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 RNU6-437P-201ENST00000459408 95 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 AL512605.2-201ENST00000592972 256 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.22□□□□□ -2.21
RAB40ALP0C0E4 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.21
RAB40ALP0C0E4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 SNORA25.1-201ENST00000362326 128 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.26-201ENST00000362539 101 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 MIR215-201ENST00000384858 110 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 RNU2-31P-201ENST00000516954 155 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 AP003733.2-201ENST00000529409 171 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 MIR2681-201ENST00000581814 105 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 AC007742.2-201ENST00000618226 398 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 SNORD111.1-201ENST00000516421 86 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 AC005357.1-201ENST00000588399 301 ntBASIC1.2□□□□□ -2.22
RAB40ALP0C0E4 RNU6-1209P-201ENST00000363655 107 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 RNU6-899P-201ENST00000363947 107 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 SNORD14E-201ENST00000364009 85 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 RNU6-326P-201ENST00000365480 107 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 MIR136-201ENST00000385207 82 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 RNU6-763P-201ENST00000390865 106 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 AL731563.1-201ENST00000442202 214 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 RNA5SP102-201ENST00000516865 106 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 AL160236.1-201ENST00000556317 195 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 AC087685.1-201ENST00000587507 141 ntBASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.19□□□□□ -2.22
RAB40ALP0C0E4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 RNU6-674P-201ENST00000363831 107 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 AC090142.3-201ENST00000519012 385 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 AP003072.1-201ENST00000531740 145 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 RPL23AP91-201ENST00000569211 455 ntBASIC1.18□□□□□ -2.22
RAB40ALP0C0E4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 Y_RNA.422-201ENST00000384054 114 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 MIR15B-201ENST00000385045 98 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 MIR1278-201ENST00000408753 81 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 AC091959.1-201ENST00000495857 238 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
RAB40ALP0C0E4 RNU6-442P-201ENST00000383968 104 ntBASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 AC113618.1-201ENST00000416747 285 ntBASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.16□□□□□ -2.22
RAB40ALP0C0E4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
RAB40ALP0C0E4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms