Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RNU2-29P-201ENST00000410423 189 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 SNRPGP14-201ENST00000435400 219 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 SNORA19.3-201ENST00000516165 130 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.92□□□□□ -2.72
HMGN1P05114 CPDP1-201ENST00000579660 283 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 AC005972.2-201ENST00000604690 348 ntBASIC-1.92□□□□□ -2.72
HMGN1P05114 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 RNU6-268P-201ENST00000364174 107 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 RNU6-108P-201ENST00000365558 107 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 RNY3P5-201ENST00000384127 102 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 MIR1-2-201ENST00000384961 85 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.93□□□□□ -2.72
HMGN1P05114 MTND1P24-201ENST00000552175 861 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 AC140658.3-201ENST00000567603 271 ntBASIC-1.93□□□□□ -2.72
HMGN1P05114 RNU6-501P-201ENST00000364072 100 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 RNA5SP118-201ENST00000410385 109 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 MTCO2P21-201ENST00000419780 677 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 AL133255.1-201ENST00000606374 441 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 AL607023.1-201ENST00000620045 248 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 MIR6086-201ENST00000638065 55 ntBASIC-1.94□□□□□ -2.72
HMGN1P05114 RNU6-10P-201ENST00000384036 107 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 AC006210.1-201ENST00000424882 111 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.95□□□□□ -2.72
HMGN1P05114 MTCO1P29-201ENST00000496868 288 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 SNORA25.13-201ENST00000516395 103 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 AC022878.1-201ENST00000530684 149 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 AC006566.1-201ENST00000608943 513 ntBASIC-1.95□□□□□ -2.72
HMGN1P05114 RNU6-926P-201ENST00000384075 107 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 SNORD110-201ENST00000408189 75 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 USP9YP12-201ENST00000450481 570 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 SNORA13-201ENST00000458790 133 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 MIR3165-201ENST00000579874 75 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 AL158063.1-201ENST00000615349 536 ntBASIC-1.96□□□□□ -2.72
HMGN1P05114 SNORD50.1-201ENST00000362987 71 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 RNU6-721P-201ENST00000410155 105 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 RNU6-602P-201ENST00000411155 105 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 MTATP6P17-201ENST00000431030 672 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.97□□□□□ -2.72
HMGN1P05114 snoU13.19-201ENST00000459148 104 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.97□□□□□ -2.72
HMGN1P05114 MTND5P34-201ENST00000568888 325 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 MIR8055-201ENST00000610739 97 ntBASIC-1.97□□□□□ -2.72
HMGN1P05114 AL596211.1-201ENST00000569873 2277 ntBASIC-1.97□□□□□ -2.73
HMGN1P05114 RNU6-502P-201ENST00000362419 108 ntBASIC-1.98□□□□□ -2.73
HMGN1P05114 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.98□□□□□ -2.73
HMGN1P05114 AC134698.4-201ENST00000523451 826 ntBASIC-1.98□□□□□ -2.73
HMGN1P05114 AC090616.2-202ENST00000584248 222 ntBASIC-1.98□□□□□ -2.73
HMGN1P05114 AC087683.2-201ENST00000611384 326 ntBASIC-1.98□□□□□ -2.73
HMGN1P05114 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 SNORA72.6-201ENST00000384520 129 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 BX276092.1-201ENST00000427368 251 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 snoU13.11-201ENST00000459219 104 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.99□□□□□ -2.73
HMGN1P05114 MIR4306-201ENST00000583390 91 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 Z84480.1-201ENST00000605131 311 ntBASIC-1.99□□□□□ -2.73
HMGN1P05114 Y_RNA.518-201ENST00000384552 113 ntBASIC-2□□□□□ -2.73
HMGN1P05114 MIR587-201ENST00000384845 96 ntBASIC-2□□□□□ -2.73
HMGN1P05114 SCARNA18B-201ENST00000458806 135 ntBASIC-2□□□□□ -2.73
HMGN1P05114 RNU6-958P-201ENST00000516995 106 ntBASIC-2□□□□□ -2.73
HMGN1P05114 RNU6-86P-201ENST00000606534 107 ntBASIC-2□□□□□ -2.73
HMGN1P05114 AC109347.2-201ENST00000610220 349 ntBASIC-2□□□□□ -2.73
HMGN1P05114 AL391262.2-201ENST00000622466 494 ntBASIC-2□□□□□ -2.73
HMGN1P05114 RNU4-92P-201ENST00000363783 136 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 RNA5SP192-201ENST00000364404 120 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 RNU6-1336P-201ENST00000383886 109 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 SNORD12C-201ENST00000386307 89 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-2.01□□□□□ -2.73
HMGN1P05114 SNORD38.3-201ENST00000516599 73 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 MIR5583-1-201ENST00000580941 59 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 MIR4280-201ENST00000582178 76 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 AC027807.2-201ENST00000616099 408 ntBASIC-2.01□□□□□ -2.73
HMGN1P05114 MIR410-201ENST00000362222 80 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 Y_RNA.133-201ENST00000363428 110 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 Y_RNA.189-201ENST00000363959 112 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 SNORA72-201ENST00000384339 132 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 MT-TY-201ENST00000387409 66 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 AC011458.1-201ENST00000604034 617 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 MIR6851-201ENST00000617060 67 ntBASIC-2.02□□□□□ -2.73
HMGN1P05114 MTND5P18-201ENST00000445624 1801 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 Y_RNA.243-201ENST00000364481 109 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 Y_RNA.390-201ENST00000383932 102 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 SNORD56B-201ENST00000384713 71 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 MIR9-2-201ENST00000384838 87 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 DLGAP5P1-201ENST00000430307 464 ntBASIC-2.03□□□□□ -2.73
HMGN1P05114 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.04□□□□□ -2.74
HMGN1P05114 RNU5E-5P-201ENST00000365379 116 ntBASIC-2.04□□□□□ -2.74
HMGN1P05114 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.04□□□□□ -2.74
HMGN1P05114 RNU6-913P-201ENST00000390913 95 ntBASIC-2.04□□□□□ -2.74
HMGN1P05114 MTND2P18-201ENST00000419962 1030 ntBASIC-2.04□□□□□ -2.74
HMGN1P05114 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-2.04□□□□□ -2.74
HMGN1P05114 AC131281.1-201ENST00000522984 164 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms