Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 Y_RNA.410-201ENST00000383992 113 ntBASIC2.8□□□□□ -1.96
KRT1P04264 MIR548A2-201ENST00000384956 97 ntBASIC2.8□□□□□ -1.96
KRT1P04264 MT-TI-201ENST00000387365 69 ntBASIC2.8□□□□□ -1.96
KRT1P04264 RNU11-5P-201ENST00000391216 129 ntBASIC2.8□□□□□ -1.96
KRT1P04264 U8.17-201ENST00000391292 132 ntBASIC2.8□□□□□ -1.96
KRT1P04264 SNRPGP10-201ENST00000432323 225 ntBASIC2.8□□□□□ -1.96
KRT1P04264 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.8□□□□□ -1.96
KRT1P04264 SUMO2P16-201ENST00000519475 264 ntBASIC2.8□□□□□ -1.96
KRT1P04264 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
KRT1P04264 AC008507.4-201ENST00000585464 127 ntBASIC2.8□□□□□ -1.96
KRT1P04264 AC087685.1-201ENST00000587507 141 ntBASIC2.8□□□□□ -1.96
KRT1P04264 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRT1P04264 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRT1P04264 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRT1P04264 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRT1P04264 Y_RNA.10-201ENST00000362371 110 ntBASIC2.79□□□□□ -1.96
KRT1P04264 Y_RNA.221-201ENST00000364248 96 ntBASIC2.79□□□□□ -1.96
KRT1P04264 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
KRT1P04264 Y_RNA.244-201ENST00000364484 109 ntBASIC2.79□□□□□ -1.96
KRT1P04264 RNU6-1296P-201ENST00000383879 107 ntBASIC2.79□□□□□ -1.96
KRT1P04264 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
KRT1P04264 Y_RNA.601-201ENST00000410500 113 ntBASIC2.79□□□□□ -1.96
KRT1P04264 UBE2DNL-203ENST00000474922 222 ntBASIC2.79□□□□□ -1.96
KRT1P04264 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
KRT1P04264 RNU7-70P-201ENST00000516941 66 ntBASIC2.79□□□□□ -1.96
KRT1P04264 Y_RNA.714-201ENST00000517065 90 ntBASIC2.79□□□□□ -1.96
KRT1P04264 AC079600.2-201ENST00000550076 130 ntBASIC2.79□□□□□ -1.96
KRT1P04264 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
KRT1P04264 MIR4765-201ENST00000585007 77 ntBASIC2.79□□□□□ -1.96
KRT1P04264 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.79□□□□□ -1.96
KRT1P04264 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.79□□□□□ -1.96
KRT1P04264 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
KRT1P04264 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRT1P04264 ZNF720P1-201ENST00000562403 1939 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNU6-349P-201ENST00000362402 107 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNU6-1276P-201ENST00000365372 104 ntBASIC2.78□□□□□ -1.96
KRT1P04264 SNORA2.2-201ENST00000365473 135 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNU6-1072P-201ENST00000384703 107 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNU6-443P-201ENST00000384780 107 ntBASIC2.78□□□□□ -1.96
KRT1P04264 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
KRT1P04264 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNU6-972P-201ENST00000391208 107 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
KRT1P04264 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.78□□□□□ -1.96
KRT1P04264 RNU2-13P-201ENST00000515909 113 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
KRT1P04264 RNA5SP490-201ENST00000517141 136 ntBASIC2.78□□□□□ -1.96
KRT1P04264 FAM71BP1-201ENST00000604431 523 ntBASIC2.78□□□□□ -1.96
KRT1P04264 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRT1P04264 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRT1P04264 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.78□□□□□ -1.96
KRT1P04264 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
KRT1P04264 Y_RNA.290-201ENST00000364879 114 ntBASIC2.77□□□□□ -1.97
KRT1P04264 MIR128-1-201ENST00000384921 82 ntBASIC2.77□□□□□ -1.97
KRT1P04264 MIR518F-201ENST00000384973 87 ntBASIC2.77□□□□□ -1.97
KRT1P04264 MIR218-1-201ENST00000384999 110 ntBASIC2.77□□□□□ -1.97
KRT1P04264 RNU6-816P-201ENST00000390914 107 ntBASIC2.77□□□□□ -1.97
KRT1P04264 RNU6-1268P-201ENST00000391214 107 ntBASIC2.77□□□□□ -1.97
KRT1P04264 RNU6-1239P-201ENST00000391310 107 ntBASIC2.77□□□□□ -1.97
KRT1P04264 RNU7-164P-201ENST00000459221 62 ntBASIC2.77□□□□□ -1.97
KRT1P04264 S100A11P2-201ENST00000467589 312 ntBASIC2.77□□□□□ -1.97
KRT1P04264 RNU6-521P-201ENST00000516663 105 ntBASIC2.77□□□□□ -1.97
KRT1P04264 SCARNA3-201ENST00000517097 143 ntBASIC2.77□□□□□ -1.97
KRT1P04264 MIR4658-201ENST00000584344 65 ntBASIC2.77□□□□□ -1.97
KRT1P04264 AL359075.3-201ENST00000613288 217 ntBASIC2.77□□□□□ -1.97
KRT1P04264 MIR376A2-201ENST00000636782 80 ntBASIC2.77□□□□□ -1.97
KRT1P04264 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT1P04264 RNU6-944P-201ENST00000364023 107 ntBASIC2.76□□□□□ -1.97
KRT1P04264 Y_RNA.253-201ENST00000364562 112 ntBASIC2.76□□□□□ -1.97
KRT1P04264 SNORA4.2-201ENST00000365313 147 ntBASIC2.76□□□□□ -1.97
KRT1P04264 RNU6-1189P-201ENST00000383958 107 ntBASIC2.76□□□□□ -1.97
KRT1P04264 RNY1P6-201ENST00000384193 109 ntBASIC2.76□□□□□ -1.97
KRT1P04264 MIR1253-201ENST00000408273 105 ntBASIC2.76□□□□□ -1.97
KRT1P04264 Z98742.2-201ENST00000431564 187 ntBASIC2.76□□□□□ -1.97
KRT1P04264 MICF-203ENST00000432679 129 ntBASIC2.76□□□□□ -1.97
KRT1P04264 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.76□□□□□ -1.97
KRT1P04264 AC007229.1-201ENST00000590455 412 ntBASIC2.76□□□□□ -1.97
KRT1P04264 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRT1P04264 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRT1P04264 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
KRT1P04264 RNU6-220P-201ENST00000390919 107 ntBASIC2.75□□□□□ -1.97
KRT1P04264 RNU6-279P-201ENST00000391297 101 ntBASIC2.75□□□□□ -1.97
KRT1P04264 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.75□□□□□ -1.97
KRT1P04264 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
KRT1P04264 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT1P04264 RNA5SP112-201ENST00000515937 99 ntBASIC2.75□□□□□ -1.97
KRT1P04264 AC022217.4-201ENST00000604389 163 ntBASIC2.75□□□□□ -1.97
KRT1P04264 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
KRT1P04264 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
KRT1P04264 RNU6-1099P-201ENST00000363533 107 ntBASIC2.74□□□□□ -1.97
KRT1P04264 RNU1-133P-201ENST00000364867 167 ntBASIC2.74□□□□□ -1.97
KRT1P04264 RNU6-497P-201ENST00000365316 104 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AC096949.1-201ENST00000412047 152 ntBASIC2.74□□□□□ -1.97
KRT1P04264 RPS15AP28-201ENST00000435088 386 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AC099677.2-201ENST00000436385 175 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AC233266.1-201ENST00000454518 96 ntBASIC2.74□□□□□ -1.97
KRT1P04264 RNU1-131P-201ENST00000458943 161 ntBASIC2.74□□□□□ -1.97
KRT1P04264 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
KRT1P04264 RNU7-123P-201ENST00000515911 60 ntBASIC2.74□□□□□ -1.97
KRT1P04264 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms