Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SNORD123-201ENST00000459473 70 ntBASIC0.56□□□□□ -2.32
CD74P04233 RPL23AP54-201ENST00000495129 419 ntBASIC0.56□□□□□ -2.32
CD74P04233 Y_RNA.714-201ENST00000517065 90 ntBASIC0.56□□□□□ -2.32
CD74P04233 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
CD74P04233 MIR5188-201ENST00000583467 113 ntBASIC0.56□□□□□ -2.32
CD74P04233 RPS29P30-201ENST00000600975 111 ntBASIC0.56□□□□□ -2.32
CD74P04233 Y_RNA.772-201ENST00000606692 102 ntBASIC0.56□□□□□ -2.32
CD74P04233 AC011373.1-201ENST00000607270 237 ntBASIC0.56□□□□□ -2.32
CD74P04233 SEPT14P17-201ENST00000617978 177 ntBASIC0.56□□□□□ -2.32
CD74P04233 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CD74P04233 Y_RNA.58-201ENST00000362807 102 ntBASIC0.55□□□□□ -2.32
CD74P04233 SNORD81.1-201ENST00000363064 77 ntBASIC0.55□□□□□ -2.32
CD74P04233 Y_RNA.154-201ENST00000363624 102 ntBASIC0.55□□□□□ -2.32
CD74P04233 SNORD14E-201ENST00000364009 85 ntBASIC0.55□□□□□ -2.32
CD74P04233 Y_RNA.203-201ENST00000364106 102 ntBASIC0.55□□□□□ -2.32
CD74P04233 U8.7-201ENST00000364940 136 ntBASIC0.55□□□□□ -2.32
CD74P04233 Y_RNA.310-201ENST00000365063 113 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNY3P1-201ENST00000365085 102 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNY3-201ENST00000365484 102 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNU6-1323P-201ENST00000384025 107 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNU6-937P-201ENST00000384325 106 ntBASIC0.55□□□□□ -2.32
CD74P04233 Y_RNA.529-201ENST00000384586 119 ntBASIC0.55□□□□□ -2.32
CD74P04233 HMGN2P32-201ENST00000444648 269 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNA5SP255-201ENST00000516370 107 ntBASIC0.55□□□□□ -2.32
CD74P04233 RNA5SP480-201ENST00000516840 109 ntBASIC0.55□□□□□ -2.32
CD74P04233 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.55□□□□□ -2.32
CD74P04233 AC093027.1-201ENST00000546698 429 ntBASIC0.55□□□□□ -2.32
CD74P04233 AC122108.2-201ENST00000611946 526 ntBASIC0.55□□□□□ -2.32
CD74P04233 JPX_2.1-201ENST00000614161 69 ntBASIC0.55□□□□□ -2.32
CD74P04233 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CD74P04233 RNU6-1115P-201ENST00000362490 106 ntBASIC0.54□□□□□ -2.32
CD74P04233 Y_RNA.39-201ENST00000362620 98 ntBASIC0.54□□□□□ -2.32
CD74P04233 Y_RNA.143-201ENST00000363520 106 ntBASIC0.54□□□□□ -2.32
CD74P04233 Y_RNA.303-201ENST00000364998 94 ntBASIC0.54□□□□□ -2.32
CD74P04233 Y_RNA.456-201ENST00000384232 111 ntBASIC0.54□□□□□ -2.32
CD74P04233 Y_RNA.458-201ENST00000384240 102 ntBASIC0.54□□□□□ -2.32
CD74P04233 MIR15B-201ENST00000385045 98 ntBASIC0.54□□□□□ -2.32
CD74P04233 MIR802-201ENST00000390235 94 ntBASIC0.54□□□□□ -2.32
CD74P04233 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
CD74P04233 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
CD74P04233 AL160004.2-201ENST00000432935 350 ntBASIC0.54□□□□□ -2.32
CD74P04233 FABP5P4-201ENST00000437203 171 ntBASIC0.54□□□□□ -2.32
CD74P04233 U8.19-201ENST00000459095 133 ntBASIC0.54□□□□□ -2.32
CD74P04233 SNORD19B-201ENST00000459623 84 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU6-507P-201ENST00000516045 100 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU7-43P-201ENST00000516554 64 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU4-77P-201ENST00000516692 156 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU7-116P-201ENST00000516940 62 ntBASIC0.54□□□□□ -2.32
CD74P04233 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
CD74P04233 MIR4423-201ENST00000580922 80 ntBASIC0.54□□□□□ -2.32
CD74P04233 AC131055.1-201ENST00000584626 316 ntBASIC0.54□□□□□ -2.32
CD74P04233 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.54□□□□□ -2.32
CD74P04233 RBM11P1-201ENST00000604951 799 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU6-94P-201ENST00000607728 107 ntBASIC0.54□□□□□ -2.32
CD74P04233 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.54□□□□□ -2.32
CD74P04233 RNU6-1048P-201ENST00000364054 107 ntBASIC0.53□□□□□ -2.32
CD74P04233 RNU6-21P-201ENST00000384710 107 ntBASIC0.53□□□□□ -2.32
CD74P04233 MIR570-201ENST00000384917 97 ntBASIC0.53□□□□□ -2.32
CD74P04233 SNORD28B-201ENST00000390993 75 ntBASIC0.53□□□□□ -2.32
CD74P04233 MIR1278-201ENST00000408753 81 ntBASIC0.53□□□□□ -2.32
CD74P04233 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
CD74P04233 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
CD74P04233 AF228730.4-201ENST00000421457 183 ntBASIC0.53□□□□□ -2.32
CD74P04233 AC024067.1-201ENST00000426199 223 ntBASIC0.53□□□□□ -2.32
CD74P04233 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
CD74P04233 RN7SKP164-201ENST00000516138 266 ntBASIC0.53□□□□□ -2.32
CD74P04233 RNU6-875P-201ENST00000516488 106 ntBASIC0.53□□□□□ -2.32
CD74P04233 MIR4714-201ENST00000580728 77 ntBASIC0.53□□□□□ -2.32
CD74P04233 MIR548AR-201ENST00000582191 57 ntBASIC0.53□□□□□ -2.32
CD74P04233 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
CD74P04233 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
CD74P04233 AC010205.1-201ENST00000616668 449 ntBASIC0.53□□□□□ -2.32
CD74P04233 7SK.10-201ENST00000621414 298 ntBASIC0.53□□□□□ -2.32
CD74P04233 AC134026.1-201ENST00000623249 2239 ntBASIC0.53□□□□□ -2.33
CD74P04233 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
CD74P04233 RNU6-1209P-201ENST00000363655 107 ntBASIC0.52□□□□□ -2.33
CD74P04233 RNA5SP48-201ENST00000363969 126 ntBASIC0.52□□□□□ -2.33
CD74P04233 Y_RNA.813-201ENST00000364639 102 ntBASIC0.52□□□□□ -2.33
CD74P04233 Y_RNA.439-201ENST00000384119 94 ntBASIC0.52□□□□□ -2.33
CD74P04233 Y_RNA.462-201ENST00000384268 102 ntBASIC0.52□□□□□ -2.33
CD74P04233 SNORD38C-201ENST00000384381 69 ntBASIC0.52□□□□□ -2.33
CD74P04233 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC010655.3-201ENST00000478818 450 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.52□□□□□ -2.33
CD74P04233 AP003716.2-201ENST00000528260 108 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
CD74P04233 AP003357.1-201ENST00000604497 148 ntBASIC0.52□□□□□ -2.33
CD74P04233 AL121655.1-201ENST00000605811 308 ntBASIC0.52□□□□□ -2.33
CD74P04233 SNORD58B-201ENST00000607313 66 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC006157.1-201ENST00000611750 366 ntBASIC0.52□□□□□ -2.33
CD74P04233 MIR548AY-201ENST00000617669 107 ntBASIC0.52□□□□□ -2.33
CD74P04233 AL606534.2-204ENST00000635008 178 ntBASIC0.52□□□□□ -2.33
CD74P04233 MIR4251-201ENST00000635819 61 ntBASIC0.52□□□□□ -2.33
CD74P04233 AC112487.2-201ENST00000637950 304 ntBASIC0.52□□□□□ -2.33
CD74P04233 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.52□□□□□ -2.33
CD74P04233 Y_RNA.5-201ENST00000362334 102 ntBASIC0.51□□□□□ -2.33
CD74P04233 Y_RNA.70-201ENST00000362886 110 ntBASIC0.51□□□□□ -2.33
CD74P04233 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms