Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
MT-ND4P03905 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.33□□□□□ -2.36
MT-ND4P03905 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
MT-ND4P03905 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
MT-ND4P03905 RNU6-1209P-201ENST00000363655 107 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 Y_RNA.164-201ENST00000363709 102 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU6-268P-201ENST00000364174 107 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 Y_RNA.796-201ENST00000364268 102 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 Y_RNA.799-201ENST00000364992 102 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 SNORD81.2-201ENST00000365153 76 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU6-396P-201ENST00000365369 105 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 Y_RNA.370-201ENST00000365589 108 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU6-442P-201ENST00000383968 104 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 MIR628-201ENST00000385229 95 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AF228730.4-201ENST00000421457 183 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.32□□□□□ -2.36
MT-ND4P03905 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.32□□□□□ -2.36
MT-ND4P03905 FGF7P6-202ENST00000451282 293 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AC005042.3-201ENST00000453230 174 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 snoU13.21-201ENST00000459368 105 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RPL23AP54-201ENST00000495129 419 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU6-830P-201ENST00000516353 107 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU6-911P-201ENST00000516523 104 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 RNU7-181P-201ENST00000517234 74 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AC005730.3-201ENST00000583067 366 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 MIR151B-201ENST00000584249 96 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 DEFB117-201ENST00000602356 141 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AP003357.1-201ENST00000604497 148 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 JPX_2.1-201ENST00000614161 69 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AC022306.2-201ENST00000617563 647 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 AC007742.2-201ENST00000618226 398 ntBASIC0.32□□□□□ -2.36
MT-ND4P03905 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
MT-ND4P03905 Y_RNA.27-201ENST00000362540 103 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 SNORD81.1-201ENST00000363064 77 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 U8.7-201ENST00000364940 136 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 Y_RNA.456-201ENST00000384232 111 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 SNORA51.10-201ENST00000384418 136 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 MIR559-201ENST00000385188 96 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.31□□□□□ -2.36
MT-ND4P03905 AC127455.1-201ENST00000565496 145 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 MIR4423-201ENST00000580922 80 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 AC087685.1-201ENST00000587507 141 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 RMST_2.1-201ENST00000617263 136 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 MTND1P7-201ENST00000632801 297 ntBASIC0.31□□□□□ -2.36
MT-ND4P03905 SNORD45.3-201ENST00000363836 72 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 Y_RNA.474-201ENST00000384341 102 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MIR573-201ENST00000384964 99 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MIR802-201ENST00000390235 94 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MTCO2P33-201ENST00000402100 465 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MIR1278-201ENST00000408753 81 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
MT-ND4P03905 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.3□□□□□ -2.36
MT-ND4P03905 Y_RNA.653-201ENST00000459091 95 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 RNU7-115P-201ENST00000516433 55 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 MIR5188-201ENST00000583467 113 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 AC008507.4-201ENST00000585464 127 ntBASIC0.3□□□□□ -2.36
MT-ND4P03905 RNU6-580P-201ENST00000365159 107 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 Y_RNA.537-201ENST00000384626 109 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 SNORD72-201ENST00000390994 80 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 RNU6-559P-201ENST00000516151 98 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 AC006600.1-201ENST00000572529 153 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 MIR4791-201ENST00000607666 84 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 MIR548AY-201ENST00000617669 107 ntBASIC0.29□□□□□ -2.36
MT-ND4P03905 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
MT-ND4P03905 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
MT-ND4P03905 Y_RNA.331-201ENST00000365267 102 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 Y_RNA.376-201ENST00000365638 108 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 MIR520H-201ENST00000385126 88 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 MT-TL1-201ENST00000386347 75 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 MT-TN-201ENST00000387400 73 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 RNU6-205P-201ENST00000390858 107 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 RNU6-876P-201ENST00000391295 104 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 AL603910.2-201ENST00000407268 136 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 SNORD83.1-201ENST00000411362 77 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 AC015818.7-201ENST00000428754 109 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 AC099799.1-201ENST00000439809 192 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 AC087499.7-201ENST00000441958 109 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 RNU6-699P-201ENST00000517081 110 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 MIR3145-201ENST00000580727 82 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 AC015726.2-201ENST00000620112 122 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 MIR6513-201ENST00000621188 64 ntBASIC0.28□□□□□ -2.36
MT-ND4P03905 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
MT-ND4P03905 MIR377-201ENST00000362145 69 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 RNU6-490P-201ENST00000362985 107 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 MIR520F-201ENST00000384824 87 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 MIR499A-201ENST00000384903 122 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 VN1R91P-201ENST00000594377 169 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 AC113139.1-201ENST00000605049 239 ntBASIC0.27□□□□□ -2.37
MT-ND4P03905 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms