Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 UBE2WP1-201ENST00000362030 340 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 Y_RNA.203-201ENST00000364106 102 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 PIGPP3-201ENST00000425307 415 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 MTCYBP9-201ENST00000431021 303 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 RNU7-12P-201ENST00000516030 62 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MT-ND1P03886 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 AC013791.1-201ENST00000616619 62 ntBASIC1.19□□□□□ -2.22
MT-ND1P03886 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
MT-ND1P03886 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MT-ND1P03886 RNU1-17P-201ENST00000363022 152 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 Y_RNA.149-201ENST00000363558 117 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 RNU6-899P-201ENST00000363947 107 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 U8.5-201ENST00000364528 136 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 RNU6-740P-201ENST00000364734 105 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 MLLT10P1-201ENST00000418346 262 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 BTF3P11-201ENST00000426582 477 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 SNRPGP10-201ENST00000432323 225 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 RNU6-437P-201ENST00000459408 95 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 AC092991.1-201ENST00000477176 376 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 HMGN1P7-201ENST00000491722 313 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 AC114811.1-201ENST00000507207 168 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 MIR4643-201ENST00000577473 78 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 AC012433.1-201ENST00000588916 398 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.18□□□□□ -2.22
MT-ND1P03886 MIR335-201ENST00000362173 94 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-1209P-201ENST00000363655 107 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-674P-201ENST00000363831 107 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 Y_RNA.275-201ENST00000364726 110 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 SNORD50B-201ENST00000364995 70 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-969P-201ENST00000383900 105 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-514P-201ENST00000384208 107 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-1289P-201ENST00000384431 106 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU2-38P-201ENST00000410856 79 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU6-383P-201ENST00000410864 94 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 MTND3P2-201ENST00000438452 342 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 NDUFA4P2-201ENST00000489989 244 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 MIR5692C2-201ENST00000577959 77 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
MT-ND1P03886 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
MT-ND1P03886 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
MT-ND1P03886 Y_RNA.44-201ENST00000362676 108 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 RNU4-10P-201ENST00000364383 140 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 RNU6-574P-201ENST00000384265 107 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 MIR526A1-201ENST00000384897 85 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 MTND4LP30-201ENST00000454092 297 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 SNORD127-201ENST00000458892 86 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 AC120024.3-201ENST00000603167 156 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
MT-ND1P03886 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MT-ND1P03886 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 RNU6-199P-201ENST00000362954 107 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 RNU6-833P-201ENST00000363486 107 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 RNU6-1205P-201ENST00000363625 106 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 RNU6-211P-201ENST00000384047 107 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 RNU6-163P-201ENST00000384396 106 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 Y_RNA.572-201ENST00000384757 98 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
MT-ND1P03886 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.15□□□□□ -2.23
MT-ND1P03886 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.15□□□□□ -2.23
MT-ND1P03886 MTND1P19-201ENST00000511780 315 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 SNORD45.4-201ENST00000516629 73 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.15□□□□□ -2.23
MT-ND1P03886 U2.14-201ENST00000615943 113 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 AC027279.3-201ENST00000625055 122 ntBASIC1.15□□□□□ -2.23
MT-ND1P03886 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 AL603910.2-201ENST00000407268 136 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.14□□□□□ -2.23
MT-ND1P03886 SNORD11-201ENST00000459124 84 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.14□□□□□ -2.23
MT-ND1P03886 CYCTP-201ENST00000504253 315 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 Y_RNA.668-201ENST00000516233 93 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 RPL23AP91-201ENST00000569211 455 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 MIR3664-201ENST00000579074 99 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 MIR4503-201ENST00000582187 83 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.14□□□□□ -2.23
MT-ND1P03886 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
MT-ND1P03886 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MT-ND1P03886 RNU6-131P-201ENST00000391144 107 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 MIR891A-201ENST00000401237 79 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 MIR1298-201ENST00000408783 112 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 SNORD2.1-201ENST00000458762 69 ntBASIC1.13□□□□□ -2.23
MT-ND1P03886 RPL39P38-201ENST00000467018 153 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms