Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC093027.1-201ENST00000546698 429 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 MIR3973-201ENST00000579824 107 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNU6-94P-201ENST00000607728 107 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 AC122108.2-201ENST00000611946 526 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DQA1P01909 MIR96-201ENST00000362288 78 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.39-201ENST00000362620 98 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.813-201ENST00000364639 102 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 SNORA25.9-201ENST00000365087 128 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.551-201ENST00000384661 102 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 MIR15B-201ENST00000385045 98 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 RNU2-14P-201ENST00000411053 191 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 SNRPGP14-201ENST00000435400 219 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 RNU6-507P-201ENST00000516045 100 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 AC127455.1-201ENST00000565496 145 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 RPS29P30-201ENST00000600975 111 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 AL121655.1-201ENST00000605811 308 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 MIR8070-201ENST00000616510 88 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 AC008133.2-201ENST00000624540 351 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 MIR6516-201ENST00000630554 81 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 AL606534.2-204ENST00000635008 178 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 MIR4251-201ENST00000635819 61 ntBASIC0.51□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.191-201ENST00000363972 113 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 RNU6-801P-201ENST00000364087 105 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.252-201ENST00000364556 101 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.286-201ENST00000364813 102 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.356-201ENST00000365475 113 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 SNORD63-201ENST00000384262 68 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 RNA5SP95-201ENST00000410319 137 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 U7.7-201ENST00000459276 60 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DQA1P01909 AC012433.1-201ENST00000588916 398 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 JPX_2.1-201ENST00000614161 69 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 MIR548AY-201ENST00000617669 107 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 MIR6767-201ENST00000637302 66 ntBASIC0.5□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.70-201ENST00000362886 110 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNA5SP48-201ENST00000363969 126 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU6-268P-201ENST00000364174 107 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.315-201ENST00000365117 102 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU1-115P-201ENST00000365329 160 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.439-201ENST00000384119 94 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 SNORD38C-201ENST00000384381 69 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 SNORD72-201ENST00000390994 80 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 U8.17-201ENST00000391292 132 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU6-130P-201ENST00000411112 103 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQA1P01909 AC024067.1-201ENST00000426199 223 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU7-141P-201ENST00000459304 62 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 SNORA40.14-201ENST00000516543 86 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU11-2P-201ENST00000516898 142 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU7-181P-201ENST00000517234 74 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 AC104465.1-201ENST00000611365 139 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 PART1_1.1-201ENST00000611761 217 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 MIR6835-201ENST00000621552 64 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 AC112487.2-201ENST00000637950 304 ntBASIC0.49□□□□□ -2.33
HLA-DQA1P01909 RNU4-80P-201ENST00000363200 141 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.224-201ENST00000364308 111 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 SNORD113.3-201ENST00000364630 78 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.383-201ENST00000383855 97 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 RNU6-442P-201ENST00000383968 104 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 RNY1P14-201ENST00000384426 108 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 SNORD111-201ENST00000408139 94 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 SNORA36B-201ENST00000410438 131 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC004941.2-201ENST00000427009 228 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 U8.20-201ENST00000459445 131 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 RPS29P1-201ENST00000465274 159 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 RNU6-830P-201ENST00000516353 107 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC133485.1-201ENST00000567176 124 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC138907.6-201ENST00000568401 126 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 RPL23AP91-201ENST00000569211 455 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC008507.4-201ENST00000585464 127 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC136443.5-201ENST00000603741 370 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AL590095.2-201ENST00000604136 117 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC006157.1-201ENST00000611750 366 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.48□□□□□ -2.33
HLA-DQA1P01909 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
HLA-DQA1P01909 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.47□□□□□ -2.33
HLA-DQA1P01909 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
HLA-DQA1P01909 RNU4-50P-201ENST00000364361 141 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.263-201ENST00000364659 114 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 SNORD114-22-201ENST00000365423 72 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.471-201ENST00000384312 102 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 RNU6-21P-201ENST00000384710 107 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.579-201ENST00000390939 94 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 AL603910.2-201ENST00000407268 136 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DQA1P01909 RNU6-437P-201ENST00000459408 95 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 COX6CP6-201ENST00000490840 228 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms