Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.81□□□□□ -2.12
LDLRP01130 RPS20P10-201ENST00000451209 253 ntBASIC1.81□□□□□ -2.12
LDLRP01130 SNORD65B-201ENST00000459126 73 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
LDLRP01130 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.797-201ENST00000515977 94 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RN7SKP164-201ENST00000516138 266 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNU6-561P-201ENST00000516222 102 ntBASIC1.81□□□□□ -2.12
LDLRP01130 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.81□□□□□ -2.12
LDLRP01130 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.81□□□□□ -2.12
LDLRP01130 AL359821.1-201ENST00000605519 182 ntBASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.778-201ENST00000620203 90 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MTND1P7-201ENST00000632801 297 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MIR338-201ENST00000636369 67 ntBASIC1.81□□□□□ -2.12
LDLRP01130 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LDLRP01130 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LDLRP01130 Y_RNA.116-201ENST00000363292 103 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-151P-201ENST00000364158 107 ntBASIC1.8□□□□□ -2.12
LDLRP01130 Y_RNA.357-201ENST00000365487 109 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-969P-201ENST00000383900 105 ntBASIC1.8□□□□□ -2.12
LDLRP01130 SNORA20B-201ENST00000384220 132 ntBASIC1.8□□□□□ -2.12
LDLRP01130 Y_RNA.488-201ENST00000384403 102 ntBASIC1.8□□□□□ -2.12
LDLRP01130 SNORD116-13-201ENST00000384408 92 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-959P-201ENST00000384671 107 ntBASIC1.8□□□□□ -2.12
LDLRP01130 SNORA8.3-201ENST00000384679 139 ntBASIC1.8□□□□□ -2.12
LDLRP01130 MIR526A2-201ENST00000390198 65 ntBASIC1.8□□□□□ -2.12
LDLRP01130 SNORA48.1-201ENST00000390879 135 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNA5SP467-201ENST00000391274 118 ntBASIC1.8□□□□□ -2.12
LDLRP01130 AL117342.1-201ENST00000404861 406 ntBASIC1.8□□□□□ -2.12
LDLRP01130 EBAG9P1-201ENST00000418955 543 ntBASIC1.8□□□□□ -2.12
LDLRP01130 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
LDLRP01130 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.8□□□□□ -2.12
LDLRP01130 RPL23AP63-201ENST00000498752 471 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-1146P-201ENST00000516282 102 ntBASIC1.8□□□□□ -2.12
LDLRP01130 RNU6-426P-201ENST00000516464 97 ntBASIC1.8□□□□□ -2.12
LDLRP01130 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
LDLRP01130 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
LDLRP01130 AC109810.1-201ENST00000534066 224 ntBASIC1.8□□□□□ -2.12
LDLRP01130 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
LDLRP01130 MIR4431-201ENST00000579990 94 ntBASIC1.8□□□□□ -2.12
LDLRP01130 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
LDLRP01130 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.8□□□□□ -2.12
LDLRP01130 U1.36-201ENST00000620684 176 ntBASIC1.8□□□□□ -2.12
LDLRP01130 MIR3658-201ENST00000636291 56 ntBASIC1.8□□□□□ -2.12
LDLRP01130 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
LDLRP01130 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LDLRP01130 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LDLRP01130 SNORD114-7-201ENST00000362520 77 ntBASIC1.79□□□□□ -2.12
LDLRP01130 SNORA33-201ENST00000363664 130 ntBASIC1.79□□□□□ -2.12
LDLRP01130 RNU6-103P-201ENST00000363686 107 ntBASIC1.79□□□□□ -2.12
LDLRP01130 MIR1278-201ENST00000408753 81 ntBASIC1.79□□□□□ -2.12
LDLRP01130 RNU6-257P-201ENST00000410238 98 ntBASIC1.79□□□□□ -2.12
LDLRP01130 RNU6-383P-201ENST00000410864 94 ntBASIC1.79□□□□□ -2.12
LDLRP01130 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.79□□□□□ -2.12
LDLRP01130 AC245047.8-201ENST00000456455 284 ntBASIC1.79□□□□□ -2.12
LDLRP01130 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
LDLRP01130 RNU6-1337P-201ENST00000516525 95 ntBASIC1.79□□□□□ -2.12
LDLRP01130 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.79□□□□□ -2.12
LDLRP01130 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
LDLRP01130 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.79□□□□□ -2.12
LDLRP01130 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.79□□□□□ -2.12
LDLRP01130 Y_RNA.802-201ENST00000614892 130 ntBASIC1.79□□□□□ -2.12
LDLRP01130 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
LDLRP01130 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
LDLRP01130 SNORA27.1-201ENST00000362604 124 ntBASIC1.78□□□□□ -2.12
LDLRP01130 Y_RNA.229-201ENST00000364347 113 ntBASIC1.78□□□□□ -2.12
LDLRP01130 RNA5SP190-201ENST00000365222 118 ntBASIC1.78□□□□□ -2.12
LDLRP01130 RNU6-22P-201ENST00000384355 107 ntBASIC1.78□□□□□ -2.12
LDLRP01130 RNU6-1117P-201ENST00000384525 104 ntBASIC1.78□□□□□ -2.12
LDLRP01130 MIR616-201ENST00000385293 97 ntBASIC1.78□□□□□ -2.12
LDLRP01130 MIR873-201ENST00000401120 77 ntBASIC1.78□□□□□ -2.12
LDLRP01130 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
LDLRP01130 AC010409.1-201ENST00000487382 476 ntBASIC1.78□□□□□ -2.12
LDLRP01130 AC117454.1-201ENST00000491120 168 ntBASIC1.78□□□□□ -2.12
LDLRP01130 RNU7-115P-201ENST00000516433 55 ntBASIC1.78□□□□□ -2.12
LDLRP01130 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
LDLRP01130 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
LDLRP01130 MIR548AI-201ENST00000579940 88 ntBASIC1.78□□□□□ -2.12
LDLRP01130 RNU6-1205P-201ENST00000363625 106 ntBASIC1.77□□□□□ -2.13
LDLRP01130 RNY1P11-201ENST00000363759 113 ntBASIC1.77□□□□□ -2.13
LDLRP01130 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
LDLRP01130 Y_RNA.343-201ENST00000365354 112 ntBASIC1.77□□□□□ -2.13
LDLRP01130 RNA5SP323-201ENST00000391094 133 ntBASIC1.77□□□□□ -2.13
LDLRP01130 RNU6-1186P-201ENST00000410429 97 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.77□□□□□ -2.13
LDLRP01130 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
LDLRP01130 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.77□□□□□ -2.13
LDLRP01130 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
LDLRP01130 RPS27P22-201ENST00000478056 241 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.77□□□□□ -2.13
LDLRP01130 RNU6-1007P-201ENST00000516586 107 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.77□□□□□ -2.13
LDLRP01130 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.77□□□□□ -2.13
LDLRP01130 AL353149.1-201ENST00000610667 244 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AL365222.1-201ENST00000614661 98 ntBASIC1.77□□□□□ -2.13
LDLRP01130 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LDLRP01130 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms