Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 AC024067.1-201ENST00000426199 223 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 SEPT14P8-201ENST00000508026 178 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 RNU6-475P-201ENST00000516073 104 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 Y_RNA.711-201ENST00000516993 102 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 AC020661.2-201ENST00000560114 134 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.16□□□□□ -2.22
PDGFBP01127 POLR3GP1-201ENST00000594073 261 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.16□□□□□ -2.22
PDGFBP01127 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
PDGFBP01127 RNU6-199P-201ENST00000362954 107 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 U8.7-201ENST00000364940 136 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 RPL23AP54-201ENST00000495129 419 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 AC114811.1-201ENST00000507207 168 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 RNU7-28P-201ENST00000516759 62 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 Y_RNA.713-201ENST00000517013 96 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 RNU6-1137P-201ENST00000517073 99 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 AC131281.1-201ENST00000522984 164 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
PDGFBP01127 MIR4300-201ENST00000581016 96 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 SNORD113-5-201ENST00000607261 78 ntBASIC1.15□□□□□ -2.23
PDGFBP01127 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
PDGFBP01127 Y_RNA.26-201ENST00000362539 101 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 Y_RNA.361-201ENST00000365515 120 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 SNORD63-201ENST00000384262 68 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 MIR215-201ENST00000384858 110 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
PDGFBP01127 MTCO2P33-201ENST00000402100 465 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 MIR1278-201ENST00000408753 81 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 MIR1252-201ENST00000408861 65 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 RNU6-710P-201ENST00000410424 105 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 AC022616.4-201ENST00000522985 181 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 CYP3A137P-201ENST00000562436 69 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 BX284668.6-201ENST00000606899 438 ntBASIC1.14□□□□□ -2.23
PDGFBP01127 Y_RNA.19-201ENST00000362462 99 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 SNORD114-7-201ENST00000362520 77 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 Y_RNA.64-201ENST00000362845 102 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 Y_RNA.202-201ENST00000364083 110 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 Y_RNA.310-201ENST00000365063 113 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 RNU2-14P-201ENST00000411053 191 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 ELOCP20-201ENST00000422460 345 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.13□□□□□ -2.23
PDGFBP01127 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 Y_RNA.721-201ENST00000517207 102 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.13□□□□□ -2.23
PDGFBP01127 AC024405.2-202ENST00000532731 184 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 MIR4680-201ENST00000580906 66 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 AC120024.3-201ENST00000603167 156 ntBASIC1.13□□□□□ -2.23
PDGFBP01127 MIRLET7C-201ENST00000362160 84 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 Y_RNA.183-201ENST00000363882 113 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 Y_RNA.253-201ENST00000364562 112 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 Y_RNA.455-201ENST00000384230 98 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 MIR193B-201ENST00000384907 83 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PDGFBP01127 RNU6-121P-201ENST00000410525 99 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 RPL21P38-201ENST00000418090 167 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 SNRPGP10-201ENST00000432323 225 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.12□□□□□ -2.23
PDGFBP01127 MRPS35P2-201ENST00000508242 191 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 SNORA31.4-201ENST00000516049 129 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PDGFBP01127 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 AC044792.1-201ENST00000593294 196 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
PDGFBP01127 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.12□□□□□ -2.23
PDGFBP01127 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PDGFBP01127 Y_RNA.158-201ENST00000363651 101 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 RNU6-770P-201ENST00000363929 105 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 Y_RNA.214-201ENST00000364201 112 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 SNORA72-201ENST00000384339 132 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 Y_RNA.569-201ENST00000384749 103 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 MIR891A-201ENST00000401237 79 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 MTND5P22-201ENST00000458380 195 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 HMGN1P10-201ENST00000474557 553 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 SCARNA24.2-201ENST00000516968 130 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 AC113195.1-201ENST00000579952 141 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 GHRLOS.1-201ENST00000610995 70 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
PDGFBP01127 SNORA63.7-201ENST00000365579 123 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 Y_RNA.418-201ENST00000384029 102 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 MIR526A1-201ENST00000384897 85 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 SNORD115-46-201ENST00000390982 71 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 RNU6-131P-201ENST00000391144 107 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 AC113618.1-201ENST00000416747 285 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 AC015922.2-201ENST00000435593 184 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 HSPE1P25-201ENST00000455484 251 ntBASIC1.1□□□□□ -2.23
PDGFBP01127 LINC01399-202ENST00000458450 244 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms