Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 PIGPP3-201ENST00000425307 415 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 MTND4LP30-201ENST00000454092 297 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 AC093850.1-201ENST00000454121 251 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 HMGN1P7-201ENST00000491722 313 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 RNU7-12P-201ENST00000516030 62 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 SNORA27.4-201ENST00000516650 95 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
CEACAM4O75871 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.32□□□□□ -2.2
CEACAM4O75871 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CEACAM4O75871 Y_RNA.117-201ENST00000363294 101 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 Y_RNA.133-201ENST00000363428 110 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 Y_RNA.253-201ENST00000364562 112 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 MIR568-201ENST00000385036 95 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 RN7SKP51-201ENST00000410781 304 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 MTND3P2-201ENST00000438452 342 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 MTCO2P24-201ENST00000515611 426 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 AL358944.1-201ENST00000528537 144 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 AC127455.1-201ENST00000565496 145 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
CEACAM4O75871 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CEACAM4O75871 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 Y_RNA.44-201ENST00000362676 108 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 Y_RNA.54-201ENST00000362766 105 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-1272P-201ENST00000362776 107 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 Y_RNA.118-201ENST00000363300 101 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-1205P-201ENST00000363625 106 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-899P-201ENST00000363947 107 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 Y_RNA.293-201ENST00000364908 93 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-472P-201ENST00000384299 107 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-163P-201ENST00000384396 106 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 MIR194-1-201ENST00000384892 85 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 MIR1302-3-201ENST00000408128 138 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 MTCYBP9-201ENST00000431021 303 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.3□□□□□ -2.2
CEACAM4O75871 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
CEACAM4O75871 AC005357.1-201ENST00000588399 301 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 AL513423.1-201ENST00000621695 132 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 snoU18.1-201ENST00000629629 71 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
CEACAM4O75871 RNU6-1123P-201ENST00000362347 106 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-1084P-201ENST00000362498 107 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 Y_RNA.203-201ENST00000364106 102 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-53P-201ENST00000365367 106 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-574P-201ENST00000384265 107 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-1289P-201ENST00000384431 106 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU2-38P-201ENST00000410856 79 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 SNRPGP10-201ENST00000432323 225 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNU6-437P-201ENST00000459408 95 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 RNA5SP102-201ENST00000516865 106 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.29□□□□□ -2.2
CEACAM4O75871 MIR3937-201ENST00000580135 106 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 AL365434.2-201ENST00000607979 234 ntBASIC1.29□□□□□ -2.2
CEACAM4O75871 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
CEACAM4O75871 Y_RNA.122-201ENST00000363331 96 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 Y_RNA.224-201ENST00000364308 111 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 RNU6-740P-201ENST00000364734 105 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 Y_RNA.288-201ENST00000364854 92 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 RNU6-383P-201ENST00000410864 94 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.28□□□□□ -2.2
CEACAM4O75871 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 AC114811.1-201ENST00000507207 168 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 RNA5SP445-201ENST00000515889 115 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 AC012433.1-201ENST00000588916 398 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 AC013791.1-201ENST00000616619 62 ntBASIC1.28□□□□□ -2.2
CEACAM4O75871 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
CEACAM4O75871 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.21
CEACAM4O75871 MIRLET7C-201ENST00000362160 84 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 RNU6-1209P-201ENST00000363655 107 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 Y_RNA.217-201ENST00000364214 105 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 MIR489-201ENST00000384923 84 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 RNU6-131P-201ENST00000391144 107 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 RNU6-651P-201ENST00000411040 105 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 SNRPGP13-201ENST00000442212 177 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.27□□□□□ -2.21
CEACAM4O75871 Y_RNA.641-201ENST00000459414 105 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 Y_RNA.679-201ENST00000516416 91 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 MIR5692C2-201ENST00000577959 77 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 AC120024.3-201ENST00000603167 156 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 AP001485.1-201ENST00000604799 199 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 AL008718.3-201ENST00000610217 321 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 U2.14-201ENST00000615943 113 ntBASIC1.27□□□□□ -2.21
CEACAM4O75871 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
CEACAM4O75871 RNU4-10P-201ENST00000364383 140 ntBASIC1.26□□□□□ -2.21
CEACAM4O75871 Y_RNA.275-201ENST00000364726 110 ntBASIC1.26□□□□□ -2.21
CEACAM4O75871 Y_RNA.277-201ENST00000364754 102 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms