Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 RPL23AP54-201ENST00000495129 419 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 RNU6-1223P-201ENST00000517124 104 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 AC024405.2-202ENST00000532731 184 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 MIR4711-201ENST00000578274 70 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 MIR4659A-201ENST00000580269 81 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 MIR4676-201ENST00000583078 72 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 AL669831.3-213ENST00000636676 183 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 RNA5SP62-201ENST00000363457 110 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 Y_RNA.796-201ENST00000364268 102 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 RNU1-133P-201ENST00000364867 167 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 Y_RNA.799-201ENST00000364992 102 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 Y_RNA.310-201ENST00000365063 113 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 RNU4-45P-201ENST00000365469 141 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 RNY3P4-201ENST00000384428 101 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 Y_RNA.516-201ENST00000384541 124 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 Y_RNA.577-201ENST00000384794 101 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 SNORD78.2-201ENST00000391076 69 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 MIR936-201ENST00000401264 98 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 MIR1278-201ENST00000408753 81 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 RNA5SP247-201ENST00000411181 105 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 AC090844.1-201ENST00000422019 156 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.12□□□□□ -2.39
UPK1BO75841 RNU7-56P-201ENST00000458744 62 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 PRDX4P1-201ENST00000507189 574 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.12□□□□□ -2.39
UPK1BO75841 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
UPK1BO75841 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UPK1BO75841 RNA5SP432-201ENST00000362480 116 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 U8.7-201ENST00000364940 136 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 RNU6-708P-201ENST00000384217 107 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 MIR518A1-201ENST00000385068 85 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 MIR548F1-201ENST00000408667 84 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 RNU4-14P-201ENST00000410858 122 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK1BO75841 RNU7-116P-201ENST00000516940 62 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK1BO75841 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK1BO75841 AC087685.1-201ENST00000587507 141 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 AC022441.3-201ENST00000605737 136 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 SNORA25.18-201ENST00000607153 114 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 uc_338.6-201ENST00000613544 171 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 uc_338.4-201ENST00000616635 176 ntBASIC0.11□□□□□ -2.39
UPK1BO75841 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
UPK1BO75841 Y_RNA.4-201ENST00000362333 112 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNU6-1175P-201ENST00000365200 107 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 SNORD72-201ENST00000390994 80 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNA5SP193-201ENST00000410353 107 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNU6-710P-201ENST00000410424 105 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNU6-847P-201ENST00000411115 108 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 MTND1P2-201ENST00000430604 821 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 Y_RNA.638-201ENST00000459374 113 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNU6-718P-201ENST00000516166 105 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 RNU6-264P-201ENST00000517134 104 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 EIF1P4-201ENST00000572664 335 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 AC005730.3-201ENST00000583067 366 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 MIR4264-201ENST00000583520 66 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 AC008507.4-201ENST00000585464 127 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 AP003357.1-201ENST00000604497 148 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 AC090517.2-201ENST00000614966 680 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 U4.5-201ENST00000617137 123 ntBASIC0.1□□□□□ -2.39
UPK1BO75841 AL603910.2-201ENST00000407268 136 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 Y_RNA.605-201ENST00000410577 105 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 AF228730.4-201ENST00000421457 183 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 BTF3P11-201ENST00000426582 477 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 RNU7-62P-201ENST00000458856 62 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 MTND4P17-201ENST00000470444 350 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 AC091951.2-201ENST00000500762 203 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 SCARNA8-201ENST00000515924 131 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 RNU6-720P-201ENST00000516363 108 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 RNU7-115P-201ENST00000516433 55 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 RN7SKP295-201ENST00000517264 153 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
UPK1BO75841 Y_RNA.164-201ENST00000363709 102 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 Y_RNA.230-201ENST00000364348 109 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 SNORA1.2-201ENST00000365189 134 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 Y_RNA.646-201ENST00000410980 101 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AL589823.1-201ENST00000429577 183 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.08□□□□□ -2.4
UPK1BO75841 RNU2-13P-201ENST00000515909 113 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AC144568.1-201ENST00000520139 137 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AC127455.1-201ENST00000565496 145 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 MIR5188-201ENST00000583467 113 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 DEFB117-201ENST00000602356 141 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AC008608.1-201ENST00000603910 127 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 AL589743.1-201ENST00000551932 2712 ntBASIC0.08□□□□□ -2.4
UPK1BO75841 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
UPK1BO75841 RNU6-815P-201ENST00000384080 113 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 Y_RNA.456-201ENST00000384232 111 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 318.4 ms