Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC005730.3-201ENST00000583067 366 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 DEFB117-201ENST00000602356 141 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RBM11P1-201ENST00000604951 799 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 AL136317.1-201ENST00000612653 226 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 AC134026.1-201ENST00000623249 2239 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 SNORD114-26-201ENST00000363543 72 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.148-201ENST00000363557 117 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.203-201ENST00000364106 102 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.310-201ENST00000365063 113 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.384-201ENST00000383909 102 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.428-201ENST00000384078 102 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.505-201ENST00000384489 102 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 SNORD116-29-201ENST00000384516 83 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 MIR802-201ENST00000390235 94 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 RPL23AP54-201ENST00000495129 419 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.56□□□□□ -2.32
UPK3AO75631 RNU7-116P-201ENST00000516940 62 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 JPX_2.1-201ENST00000614161 69 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 PVT1_3.1-201ENST00000620853 95 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 AC008133.2-201ENST00000624540 351 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 MIR4251-201ENST00000635819 61 ntBASIC0.56□□□□□ -2.32
UPK3AO75631 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
UPK3AO75631 Y_RNA.142-201ENST00000363491 102 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 SNORD38C-201ENST00000384381 69 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 AC138393.2-201ENST00000414742 246 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 AC024067.1-201ENST00000426199 223 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 AC091951.2-201ENST00000500762 203 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 RNU6-277P-201ENST00000516272 106 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 Y_RNA.718-201ENST00000517110 102 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 SNORD116.3-201ENST00000517176 78 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 AC024405.2-202ENST00000532731 184 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK3AO75631 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.55□□□□□ -2.32
UPK3AO75631 MIR4272-201ENST00000635924 64 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 MIR1302-1-201ENST00000637932 143 ntBASIC0.55□□□□□ -2.32
UPK3AO75631 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
UPK3AO75631 RNU6-654P-201ENST00000364373 107 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 Y_RNA.456-201ENST00000384232 111 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 Y_RNA.463-201ENST00000384271 102 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 Y_RNA.540-201ENST00000384638 111 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 MIR7-2-201ENST00000384970 110 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 SNORD28B-201ENST00000390993 75 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
UPK3AO75631 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AC098869.1-201ENST00000481627 292 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 RNU6-1110P-201ENST00000516462 101 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 RNU7-110P-201ENST00000516891 62 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AC036111.3-201ENST00000526389 112 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK3AO75631 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 MIR4423-201ENST00000580922 80 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 MIR548AR-201ENST00000582191 57 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 Z83818.1-201ENST00000603584 150 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 Y_RNA.772-201ENST00000606692 102 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AC084781.2-201ENST00000615568 161 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AC007742.2-201ENST00000618226 398 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 AC099654.14-201ENST00000638599 341 ntBASIC0.54□□□□□ -2.32
UPK3AO75631 U8.7-201ENST00000364940 136 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 RNU6-442P-201ENST00000383968 104 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 MIR570-201ENST00000384917 97 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 SNORD111-201ENST00000408139 94 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AC005534.2-201ENST00000431047 433 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.53□□□□□ -2.32
UPK3AO75631 Y_RNA.661-201ENST00000516003 99 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 RNU11-2P-201ENST00000516898 142 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 MIR3145-201ENST00000580727 82 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AP003357.1-201ENST00000604497 148 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 AC011373.1-201ENST00000607270 237 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 MIR6516-201ENST00000630554 81 ntBASIC0.53□□□□□ -2.32
UPK3AO75631 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
UPK3AO75631 SNORD81.1-201ENST00000363064 77 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 RNU6-1209P-201ENST00000363655 107 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 SNORD113.3-201ENST00000364630 78 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 Y_RNA.393-201ENST00000383936 102 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 MIR1302-7-201ENST00000408841 72 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 AF228730.4-201ENST00000421457 183 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK3AO75631 RNU7-115P-201ENST00000516433 55 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 AC127455.1-201ENST00000565496 145 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 RN7SL793P-201ENST00000583259 296 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 AC087685.1-201ENST00000587507 141 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 RPS29P30-201ENST00000600975 111 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 AC010205.1-201ENST00000616668 449 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 MIR548AY-201ENST00000617669 107 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
UPK3AO75631 Y_RNA.390-201ENST00000383932 102 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 Y_RNA.462-201ENST00000384268 102 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 SNORA2B-201ENST00000384583 137 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 RNU6-1067P-201ENST00000384752 107 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 RNU4-30P-201ENST00000410245 143 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 AL392103.1-201ENST00000447000 198 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms