Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTND3P21-201ENST00000433774 331 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 MTND1P4-201ENST00000435196 415 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 AC024909.2-201ENST00000553035 286 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 AC104695.3-201ENST00000604052 296 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 AC240442.1-201ENST00000616055 283 ntBASIC0.26□□□□□ -2.37
NPHP4O75161 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
NPHP4O75161 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
NPHP4O75161 RNU2-54P-201ENST00000410299 190 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 RNU2-61P-201ENST00000411069 191 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 AL022718.1-201ENST00000412004 84 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 RPS29P25-201ENST00000481709 171 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 AC011352.1-201ENST00000512300 793 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 RNU6-436P-201ENST00000516171 114 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 RNU6-1213P-201ENST00000517075 94 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 AC096720.1-201ENST00000604441 183 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
NPHP4O75161 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 MIR520H-201ENST00000385126 88 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 SNORD115-47-201ENST00000391226 86 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 RNU6-613P-201ENST00000410412 108 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 RNU6-177P-201ENST00000411257 104 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 RPL17P19-201ENST00000489069 552 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.24□□□□□ -2.37
NPHP4O75161 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.24□□□□□ -2.37
NPHP4O75161 RNU6-155P-201ENST00000516347 100 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 AL355375.2-201ENST00000574825 175 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 MIR548AO-201ENST00000579992 96 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 Pinc.1-201ENST00000616452 154 ntBASIC0.24□□□□□ -2.37
NPHP4O75161 Y_RNA.453-201ENST00000384223 109 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 SNORA72-201ENST00000384339 132 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 MIR520F-201ENST00000384824 87 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 MTND2P22-201ENST00000444325 1033 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 HMGN2P32-201ENST00000444648 269 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 MIR2115-201ENST00000516657 100 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 AC022616.4-201ENST00000522985 181 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.23□□□□□ -2.37
NPHP4O75161 AC011476.5-201ENST00000615594 130 ntBASIC0.23□□□□□ -2.37
NPHP4O75161 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.23□□□□□ -2.37
NPHP4O75161 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 Y_RNA.86-201ENST00000363020 111 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 RNU6-626P-201ENST00000363354 107 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 SNORD45.3-201ENST00000363836 72 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 SNORD14E-201ENST00000364009 85 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 RNU6-20P-201ENST00000384106 107 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 Y_RNA.446-201ENST00000384178 104 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 RNU6-205P-201ENST00000390858 107 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 RNA5SP118-201ENST00000410385 109 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 MTND4P28-201ENST00000426217 387 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 CHEK2P4-201ENST00000450340 246 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 MTCO3P10-201ENST00000455912 772 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.22□□□□□ -2.37
NPHP4O75161 RNU7-181P-201ENST00000517234 74 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.22□□□□□ -2.37
NPHP4O75161 AC060780.3-201ENST00000589464 80 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 PISRT1.1-201ENST00000616930 107 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 AC048344.4-201ENST00000619744 527 ntBASIC0.22□□□□□ -2.37
NPHP4O75161 MIR18A-201ENST00000362310 71 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.168-201ENST00000363740 102 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNY3P11-201ENST00000364153 102 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.339-201ENST00000365325 102 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU6-396P-201ENST00000365369 105 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU6-977P-201ENST00000516411 103 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 AC005176.2-201ENST00000596933 147 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.88-201ENST00000363029 99 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU6-593P-201ENST00000364716 112 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU6-934P-201ENST00000365154 107 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.329-201ENST00000365209 107 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.436-201ENST00000384097 102 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 SNORD38C-201ENST00000384381 69 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.573-201ENST00000384763 105 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 SNORA75.4-201ENST00000391278 119 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 AC016907.1-201ENST00000419483 435 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 AC107399.1-201ENST00000451226 265 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 RNU7-169P-201ENST00000459456 61 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.21□□□□□ -2.38
NPHP4O75161 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.21□□□□□ -2.38
NPHP4O75161 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.21□□□□□ -2.38
NPHP4O75161 MIR3612-201ENST00000579753 87 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.21□□□□□ -2.38
NPHP4O75161 AC015726.2-201ENST00000620112 122 ntBASIC0.21□□□□□ -2.38
NPHP4O75161 Y_RNA.72-201ENST00000362894 103 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 RNU4-24P-201ENST00000364565 139 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 SNORA69.1-201ENST00000390904 137 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 RNU6-192P-201ENST00000391253 100 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 U8.17-201ENST00000391292 132 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 RNU6-1156P-201ENST00000410365 100 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.2□□□□□ -2.38
NPHP4O75161 snoU13.19-201ENST00000459148 104 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 MIR4771-2-201ENST00000577758 74 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 MIR4771-1-201ENST00000582617 74 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
NPHP4O75161 MTND1P7-201ENST00000632801 297 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 MIR3688-2-201ENST00000636963 87 ntBASIC0.2□□□□□ -2.38
NPHP4O75161 Y_RNA.3-201ENST00000362331 103 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 Y_RNA.482-201ENST00000384377 111 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms