Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 RNU6-1156P-201ENST00000410365 100 ntBASIC0.42□□□□□ -2.34
SMPD2O60906 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
SMPD2O60906 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
SMPD2O60906 MIR548AR-201ENST00000582191 57 ntBASIC0.42□□□□□ -2.34
SMPD2O60906 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
SMPD2O60906 RNU6-442P-201ENST00000383968 104 ntBASIC0.41□□□□□ -2.34
SMPD2O60906 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
SMPD2O60906 RNU6-1199P-201ENST00000411249 104 ntBASIC0.41□□□□□ -2.34
SMPD2O60906 HMGN1P33-201ENST00000432945 451 ntBASIC0.41□□□□□ -2.34
SMPD2O60906 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.41□□□□□ -2.34
SMPD2O60906 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.41□□□□□ -2.34
SMPD2O60906 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.41□□□□□ -2.34
SMPD2O60906 RNU6-1012P-201ENST00000516606 109 ntBASIC0.41□□□□□ -2.34
SMPD2O60906 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.41□□□□□ -2.34
SMPD2O60906 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 Y_RNA.178-201ENST00000363832 102 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 RNU6-926P-201ENST00000384075 107 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 RNU6-20P-201ENST00000384106 107 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 Y_RNA.516-201ENST00000384541 124 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 MT-TN-201ENST00000387400 73 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 RNU6-1007P-201ENST00000516586 107 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 AC060780.3-201ENST00000589464 80 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 Pinc.1-201ENST00000616452 154 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
SMPD2O60906 MIR377-201ENST00000362145 69 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 Y_RNA.148-201ENST00000363557 117 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 Y_RNA.172-201ENST00000363765 102 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 Y_RNA.537-201ENST00000384626 109 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 MIR802-201ENST00000390235 94 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 MCFD2P1-201ENST00000417812 300 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 AC024067.1-201ENST00000426199 223 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 MTND1P2-201ENST00000430604 821 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 AC022441.3-201ENST00000605737 136 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 JPX_2.1-201ENST00000614161 69 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 AL669831.3-213ENST00000636676 183 ntBASIC0.39□□□□□ -2.35
SMPD2O60906 SNORA1.2-201ENST00000365189 134 ntBASIC0.38□□□□□ -2.35
SMPD2O60906 MTATP6P26-201ENST00000445926 662 ntBASIC0.38□□□□□ -2.35
SMPD2O60906 SCARNA8-201ENST00000515924 131 ntBASIC0.38□□□□□ -2.35
SMPD2O60906 RNU6-911P-201ENST00000516523 104 ntBASIC0.38□□□□□ -2.35
SMPD2O60906 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.37□□□□□ -2.35
SMPD2O60906 Y_RNA.6-201ENST00000362350 114 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 Y_RNA.146-201ENST00000363549 102 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 Y_RNA.203-201ENST00000364106 102 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 RNU6-580P-201ENST00000365159 107 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 Y_RNA.456-201ENST00000384232 111 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 MIR573-201ENST00000384964 99 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 SNORA75.6-201ENST00000391318 127 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 MTND1P34-201ENST00000438556 671 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 MIR2681-201ENST00000581814 105 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 AC015726.2-201ENST00000620112 122 ntBASIC0.37□□□□□ -2.35
SMPD2O60906 SNORA51.10-201ENST00000384418 136 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 RNU6-1215P-201ENST00000384441 102 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 RNU6-855P-201ENST00000410395 104 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 AC016907.1-201ENST00000419483 435 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.36□□□□□ -2.35
SMPD2O60906 RN7SKP295-201ENST00000517264 153 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.36□□□□□ -2.35
SMPD2O60906 MIR5690-201ENST00000583739 73 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 POLR3GP1-201ENST00000594073 261 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 AP000753.3-201ENST00000604083 169 ntBASIC0.36□□□□□ -2.35
SMPD2O60906 Y_RNA.341-201ENST00000365341 102 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 SNORD28B-201ENST00000390993 75 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 U8.17-201ENST00000391292 132 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 Y_RNA.605-201ENST00000410577 105 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 RNU2-70P-201ENST00000410718 179 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 AC005042.3-201ENST00000453230 174 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 Y_RNA.635-201ENST00000459041 101 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 MIR4659A-201ENST00000580269 81 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 MIR5188-201ENST00000583467 113 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 AP003357.1-201ENST00000604497 148 ntBASIC0.35□□□□□ -2.35
SMPD2O60906 Y_RNA.329-201ENST00000365209 107 ntBASIC0.34□□□□□ -2.36
SMPD2O60906 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.34□□□□□ -2.36
SMPD2O60906 RNU6-358P-201ENST00000516564 75 ntBASIC0.34□□□□□ -2.36
SMPD2O60906 RNU7-30P-201ENST00000516835 62 ntBASIC0.34□□□□□ -2.36
SMPD2O60906 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SMPD2O60906 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SMPD2O60906 Y_RNA.310-201ENST00000365063 113 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 Y_RNA.433-201ENST00000384089 102 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SMPD2O60906 RNU6-470P-201ENST00000515954 104 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 AC012433.1-201ENST00000588916 398 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 AC025253.1-201ENST00000613623 543 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.33□□□□□ -2.36
SMPD2O60906 Y_RNA.27-201ENST00000362540 103 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNU6-767P-201ENST00000384132 107 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 MIR628-201ENST00000385229 95 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNA5SP63-201ENST00000391225 112 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNU6-847P-201ENST00000411115 108 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 SNRPGP14-201ENST00000435400 219 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.32□□□□□ -2.36
SMPD2O60906 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms