Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
SSX4O60224 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.35□□□□□ -2.19
SSX4O60224 AC005357.1-201ENST00000588399 301 ntBASIC1.35□□□□□ -2.19
SSX4O60224 AL513534.2-201ENST00000603836 250 ntBASIC1.35□□□□□ -2.19
SSX4O60224 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
SSX4O60224 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.19
SSX4O60224 RNU6-1084P-201ENST00000362498 107 ntBASIC1.34□□□□□ -2.19
SSX4O60224 Y_RNA.376-201ENST00000365638 108 ntBASIC1.34□□□□□ -2.19
SSX4O60224 RNU6-662P-201ENST00000384253 104 ntBASIC1.34□□□□□ -2.19
SSX4O60224 MIR653-201ENST00000385279 96 ntBASIC1.34□□□□□ -2.19
SSX4O60224 MIR548F4-201ENST00000408515 105 ntBASIC1.34□□□□□ -2.19
SSX4O60224 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.34□□□□□ -2.19
SSX4O60224 SERF1AP1-201ENST00000514575 187 ntBASIC1.34□□□□□ -2.19
SSX4O60224 DEFB108E-201ENST00000524692 240 ntBASIC1.34□□□□□ -2.19
SSX4O60224 AC090049.2-201ENST00000550377 109 ntBASIC1.34□□□□□ -2.19
SSX4O60224 MIR3664-201ENST00000579074 99 ntBASIC1.34□□□□□ -2.19
SSX4O60224 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
SSX4O60224 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SSX4O60224 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SSX4O60224 RNU6-1272P-201ENST00000362776 107 ntBASIC1.33□□□□□ -2.2
SSX4O60224 RNU6-1209P-201ENST00000363655 107 ntBASIC1.33□□□□□ -2.2
SSX4O60224 RNU6-674P-201ENST00000363831 107 ntBASIC1.33□□□□□ -2.2
SSX4O60224 Y_RNA.796-201ENST00000364268 102 ntBASIC1.33□□□□□ -2.2
SSX4O60224 Y_RNA.799-201ENST00000364992 102 ntBASIC1.33□□□□□ -2.2
SSX4O60224 SNORA2.2-201ENST00000365473 135 ntBASIC1.33□□□□□ -2.2
SSX4O60224 Y_RNA.459-201ENST00000384251 102 ntBASIC1.33□□□□□ -2.2
SSX4O60224 MIR526A1-201ENST00000384897 85 ntBASIC1.33□□□□□ -2.2
SSX4O60224 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX4O60224 AL078595.1-201ENST00000404458 226 ntBASIC1.33□□□□□ -2.2
SSX4O60224 MIR1278-201ENST00000408753 81 ntBASIC1.33□□□□□ -2.2
SSX4O60224 TRBVB-201ENST00000477100 408 ntBASIC1.33□□□□□ -2.2
SSX4O60224 SNORD45.4-201ENST00000516629 73 ntBASIC1.33□□□□□ -2.2
SSX4O60224 SNORA27.4-201ENST00000516650 95 ntBASIC1.33□□□□□ -2.2
SSX4O60224 Y_RNA.714-201ENST00000517065 90 ntBASIC1.33□□□□□ -2.2
SSX4O60224 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
SSX4O60224 CYP3A52P-201ENST00000563326 91 ntBASIC1.33□□□□□ -2.2
SSX4O60224 MIR4719-201ENST00000585233 84 ntBASIC1.33□□□□□ -2.2
SSX4O60224 AL360085.1-201ENST00000604713 532 ntBASIC1.33□□□□□ -2.2
SSX4O60224 AP001282.2-201ENST00000616149 309 ntBASIC1.33□□□□□ -2.2
SSX4O60224 SNORD50B-201ENST00000364995 70 ntBASIC1.32□□□□□ -2.2
SSX4O60224 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
SSX4O60224 RNU6-969P-201ENST00000383900 105 ntBASIC1.32□□□□□ -2.2
SSX4O60224 Y_RNA.574-201ENST00000384766 95 ntBASIC1.32□□□□□ -2.2
SSX4O60224 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
SSX4O60224 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SSX4O60224 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX4O60224 BTF3P11-201ENST00000426582 477 ntBASIC1.32□□□□□ -2.2
SSX4O60224 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
SSX4O60224 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
SSX4O60224 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
SSX4O60224 AL117187.1-201ENST00000555482 181 ntBASIC1.32□□□□□ -2.2
SSX4O60224 AC136443.5-201ENST00000603741 370 ntBASIC1.32□□□□□ -2.2
SSX4O60224 MIR8070-201ENST00000616510 88 ntBASIC1.32□□□□□ -2.2
SSX4O60224 AC013791.1-201ENST00000616619 62 ntBASIC1.32□□□□□ -2.2
SSX4O60224 MIR8062-201ENST00000621515 85 ntBASIC1.32□□□□□ -2.2
SSX4O60224 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSX4O60224 RNU6-1205P-201ENST00000363625 106 ntBASIC1.31□□□□□ -2.2
SSX4O60224 Y_RNA.217-201ENST00000364214 105 ntBASIC1.31□□□□□ -2.2
SSX4O60224 Y_RNA.237-201ENST00000364439 102 ntBASIC1.31□□□□□ -2.2
SSX4O60224 SNORA25.9-201ENST00000365087 128 ntBASIC1.31□□□□□ -2.2
SSX4O60224 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
SSX4O60224 SNORD41-201ENST00000386967 70 ntBASIC1.31□□□□□ -2.2
SSX4O60224 AL451046.2-201ENST00000403074 277 ntBASIC1.31□□□□□ -2.2
SSX4O60224 MIR1298-201ENST00000408783 112 ntBASIC1.31□□□□□ -2.2
SSX4O60224 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX4O60224 Y_RNA.641-201ENST00000459414 105 ntBASIC1.31□□□□□ -2.2
SSX4O60224 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
SSX4O60224 SCARNA15.1-201ENST00000516384 125 ntBASIC1.31□□□□□ -2.2
SSX4O60224 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
SSX4O60224 RPL23AP91-201ENST00000569211 455 ntBASIC1.31□□□□□ -2.2
SSX4O60224 MIR2681-201ENST00000581814 105 ntBASIC1.31□□□□□ -2.2
SSX4O60224 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
SSX4O60224 GHRLOS.1-201ENST00000610995 70 ntBASIC1.31□□□□□ -2.2
SSX4O60224 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
SSX4O60224 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
SSX4O60224 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
SSX4O60224 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
SSX4O60224 UBE2WP1-201ENST00000362030 340 ntBASIC1.3□□□□□ -2.2
SSX4O60224 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
SSX4O60224 Y_RNA.176-201ENST00000363815 109 ntBASIC1.3□□□□□ -2.2
SSX4O60224 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MIR499A-201ENST00000384903 122 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MIR452-201ENST00000385020 85 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MT-TW-201ENST00000387382 68 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
SSX4O60224 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
SSX4O60224 NDUFA4P2-201ENST00000489989 244 ntBASIC1.3□□□□□ -2.2
SSX4O60224 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.3□□□□□ -2.2
SSX4O60224 RNU6-327P-201ENST00000516270 127 ntBASIC1.3□□□□□ -2.2
SSX4O60224 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
SSX4O60224 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
SSX4O60224 MIR5692C2-201ENST00000577959 77 ntBASIC1.3□□□□□ -2.2
SSX4O60224 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
SSX4O60224 AC007742.2-201ENST00000618226 398 ntBASIC1.3□□□□□ -2.2
SSX4O60224 snoU18.1-201ENST00000629629 71 ntBASIC1.3□□□□□ -2.2
SSX4O60224 AC068700.1-201ENST00000565862 3754 ntBASIC1.3□□□□□ -2.2
SSX4O60224 Y_RNA.461-201ENST00000384263 103 ntBASIC1.29□□□□□ -2.2
SSX4O60224 Y_RNA.483-201ENST00000384380 101 ntBASIC1.29□□□□□ -2.2
SSX4O60224 MIR1302-6-201ENST00000408466 90 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms