Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR624-201ENST00000385217 97 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU6-220P-201ENST00000390919 107 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU11-5P-201ENST00000391216 129 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU1-41P-201ENST00000516161 162 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU1-48P-201ENST00000516400 162 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 SCARNA16.3-201ENST00000516595 184 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU6-1270P-201ENST00000517128 108 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU7-128P-201ENST00000517247 62 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 AL670379.3-201ENST00000605040 251 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SRGAP3O43295 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SRGAP3O43295 MIR548A3-201ENST00000385297 97 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 RNA5SP323-201ENST00000391094 133 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.69□□□□□ -1.98
SRGAP3O43295 RNU6-589P-201ENST00000516485 107 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 RNU6-504P-201ENST00000516568 104 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 AC091178.2-201ENST00000584401 117 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 AL365205.2-201ENST00000594586 68 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 AL022345.2-201ENST00000606307 135 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 AL121890.5-201ENST00000620848 304 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 MIR6132-201ENST00000622083 109 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 MIR6079-201ENST00000635807 62 ntBASIC2.69□□□□□ -1.98
SRGAP3O43295 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SRGAP3O43295 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
SRGAP3O43295 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SRGAP3O43295 U8.2-201ENST00000363156 134 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 SNORA1-201ENST00000384107 130 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 SNORA64-201ENST00000384674 134 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 SNORD72-201ENST00000390994 80 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 AL023284.1-201ENST00000403956 276 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 SNORA11.4-201ENST00000408823 129 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SRGAP3O43295 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 RNU6-781P-201ENST00000516377 101 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 MIR338-201ENST00000636369 67 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.68□□□□□ -1.98
SRGAP3O43295 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.68□□□□□ -1.98
SRGAP3O43295 MTND5P32-201ENST00000560711 1802 ntBASIC2.68□□□□□ -1.98
SRGAP3O43295 AC005336.3-201ENST00000623833 2679 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
SRGAP3O43295 SNORA33-201ENST00000363664 130 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 RNA5SP125-201ENST00000364843 120 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 MIR891A-201ENST00000401237 79 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 MTATP6P21-201ENST00000440681 189 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 AC018868.1-201ENST00000491307 315 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 RNU1-142P-201ENST00000516682 145 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 MIR3945-201ENST00000581853 98 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 AC018630.2-201ENST00000534866 2403 ntBASIC2.67□□□□□ -1.98
SRGAP3O43295 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
SRGAP3O43295 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.66□□□□□ -1.98
SRGAP3O43295 MIR126-201ENST00000362291 85 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 SNORA67.3-201ENST00000384366 140 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 SNORD116-21-201ENST00000384507 92 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 MIR802-201ENST00000390235 94 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 SNORA48.3-201ENST00000391081 134 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 RN7SKP192-201ENST00000411291 327 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 AF228730.3-201ENST00000436691 102 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.66□□□□□ -1.98
SRGAP3O43295 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SRGAP3O43295 RNU6-461P-201ENST00000364195 107 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 SNORA25B-201ENST00000365507 128 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 SNORD61-201ENST00000384252 73 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 SNORA8-201ENST00000384574 139 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 Y_RNA.617-201ENST00000410920 90 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 AL353689.1-201ENST00000438895 199 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 Y_RNA.666-201ENST00000516187 112 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 RNU6-341P-201ENST00000516973 96 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.65□□□□□ -1.99
SRGAP3O43295 AC008507.4-201ENST00000585464 127 ntBASIC2.65□□□□□ -1.99
SRGAP3O43295 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.65□□□□□ -1.99
SRGAP3O43295 MIRLET7G-201ENST00000362280 84 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 Y_RNA.35-201ENST00000362601 101 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 SRIP3-201ENST00000413200 219 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
SRGAP3O43295 AC003685.2-201ENST00000422795 395 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 Y_RNA.651-201ENST00000459380 103 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 AC104435.1-201ENST00000483483 166 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 RN7SKP19-201ENST00000516016 252 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 MIR4648-201ENST00000580107 72 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 AC025166.1-201ENST00000612411 163 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 AL591926.4-201ENST00000616895 298 ntBASIC2.64□□□□□ -1.99
SRGAP3O43295 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SRGAP3O43295 ICE2P2-201ENST00000483823 2787 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SRGAP3O43295 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SRGAP3O43295 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SRGAP3O43295 Y_RNA.99-201ENST00000363138 105 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 SNORD114-6-201ENST00000364393 72 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 RNU6-755P-201ENST00000364400 103 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 Y_RNA.346-201ENST00000365385 112 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 RNU6-160P-201ENST00000384591 107 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms