Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SNRPGP10-201ENST00000432323 225 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.14□□□□□ -2.43
CHD2O14647 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.14□□□□□ -2.43
CHD2O14647 RNU7-181P-201ENST00000517234 74 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 RBM11P1-201ENST00000604951 799 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 AL359880.1-201ENST00000621879 266 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 RNA5SP517-201ENST00000364724 117 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
CHD2O14647 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNA5SP268-201ENST00000516828 124 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU1-54P-201ENST00000517181 120 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU6-483P-201ENST00000384088 108 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU6-514P-201ENST00000384208 107 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU6-318P-201ENST00000384283 103 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 SNORA8.2-201ENST00000384372 139 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.15□□□□□ -2.43
CHD2O14647 SNRPGP14-201ENST00000435400 219 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 FCF1P4-201ENST00000448326 183 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 RNU6-314P-201ENST00000516574 104 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.15□□□□□ -2.43
CHD2O14647 MIR548AO-201ENST00000579992 96 ntBASIC-0.15□□□□□ -2.43
CHD2O14647 SNORA24-201ENST00000384096 131 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 RNU6-205P-201ENST00000390858 107 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.16□□□□□ -2.44
CHD2O14647 snoU13.2-201ENST00000459201 104 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 RNU7-116P-201ENST00000516940 62 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 AL355297.3-201ENST00000604082 446 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 AC073114.1-201ENST00000612027 490 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 AC092794.2-201ENST00000620933 563 ntBASIC-0.16□□□□□ -2.44
CHD2O14647 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNA5SP117-201ENST00000365294 118 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNU6-815P-201ENST00000384080 113 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR518F-201ENST00000384973 87 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 AL031003.1-201ENST00000404229 172 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.17□□□□□ -2.44
CHD2O14647 RNU2-13P-201ENST00000515909 113 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNU6-911P-201ENST00000516523 104 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 IGLVI-20-201ENST00000519296 130 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR8055-201ENST00000610739 97 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR6128-201ENST00000615528 109 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MTND1P7-201ENST00000632801 297 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.17□□□□□ -2.44
CHD2O14647 RNU7-87P-201ENST00000459343 62 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNU6-830P-201ENST00000516353 107 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 RNA5SP94-201ENST00000516917 108 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 AC022306.2-201ENST00000617563 647 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 AL391262.2-201ENST00000622466 494 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 MIR1321-201ENST00000637766 79 ntBASIC-0.17□□□□□ -2.44
CHD2O14647 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.17□□□□□ -2.44
CHD2O14647 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-747P-201ENST00000390928 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-241P-201ENST00000391148 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-192P-201ENST00000391253 100 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 MTCO3P40-201ENST00000392516 676 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 MIR190B-201ENST00000401119 79 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 MIR938-201ENST00000401216 83 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-447P-201ENST00000410293 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-355P-201ENST00000410427 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-791P-201ENST00000410467 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-705P-201ENST00000410601 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-860P-201ENST00000410860 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU6-785P-201ENST00000411324 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU7-185P-201ENST00000459215 60 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 AC108676.2-201ENST00000605225 163 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 AC018462.2-201ENST00000605375 395 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.18□□□□□ -2.44
CHD2O14647 U6.90-201ENST00000614007 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 U6.70-201ENST00000620287 104 ntBASIC-0.18□□□□□ -2.44
CHD2O14647 RNU4-73P-201ENST00000363164 141 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 RNY4P3-201ENST00000365254 95 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 SNORA69.1-201ENST00000390904 137 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
CHD2O14647 RNU6-329P-201ENST00000459618 107 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 RNU6-864P-201ENST00000516256 108 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 RNU6-835P-201ENST00000516974 104 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 Z99129.1-201ENST00000612510 255 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 MIR3662-201ENST00000637030 95 ntBASIC-0.19□□□□□ -2.44
CHD2O14647 RNU6-593P-201ENST00000364716 112 ntBASIC-0.2□□□□□ -2.44
CHD2O14647 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms