Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-784P-201ENST00000384330 106 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
CHD1O14646 BX276092.1-201ENST00000427368 251 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 SNORA13-201ENST00000458790 133 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 MTND5P34-201ENST00000568888 325 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 RNU6-85P-201ENST00000605989 107 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 AC002044.1-201ENST00000606707 158 ntBASIC-1.56□□□□□ -2.66
CHD1O14646 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
CHD1O14646 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNU6-403P-201ENST00000363163 104 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNY4P28-201ENST00000365281 93 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 MIR588-201ENST00000384900 83 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNY4-201ENST00000516507 96 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 AC022616.4-201ENST00000522985 181 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 AL512286.1-201ENST00000439244 400 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNU6-287P-201ENST00000516230 98 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 RNU6-107P-201ENST00000516643 102 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 MIR4491-201ENST00000581087 68 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 MIR6082-201ENST00000613604 109 ntBASIC-1.57□□□□□ -2.66
CHD1O14646 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.58□□□□□ -2.66
CHD1O14646 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.58□□□□□ -2.66
CHD1O14646 RNU6-958P-201ENST00000516995 106 ntBASIC-1.58□□□□□ -2.66
CHD1O14646 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.58□□□□□ -2.66
CHD1O14646 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.58□□□□□ -2.66
CHD1O14646 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 RNU6-455P-201ENST00000384681 107 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 MTATP6P14-201ENST00000455189 673 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 RNU7-67P-201ENST00000459003 62 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 RNU6-329P-201ENST00000459618 107 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 RPL39P5-202ENST00000512505 151 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 MIR5591-201ENST00000578248 65 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 AC005771.1-201ENST00000585581 349 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 AC073648.5-201ENST00000603502 305 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 AL133255.1-201ENST00000606374 441 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 AL121757.2-201ENST00000611223 313 ntBASIC-1.59□□□□□ -2.66
CHD1O14646 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.6□□□□□ -2.67
CHD1O14646 MTATP6P17-201ENST00000431030 672 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 AC018710.1-201ENST00000506509 158 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 AC091144.1-201ENST00000519573 138 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 MTATP6P15-201ENST00000527233 835 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 MIR8066-201ENST00000617280 78 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 MIR487A-201ENST00000385009 80 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.6□□□□□ -2.67
CHD1O14646 MTCO2P27-201ENST00000420740 428 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.6□□□□□ -2.67
CHD1O14646 HSPE1P23-201ENST00000509838 286 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 RNU6-765P-201ENST00000516916 99 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 AC026421.1-201ENST00000519101 163 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 BNIP3P40-201ENST00000596017 556 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 AC009248.2-201ENST00000619826 254 ntBASIC-1.6□□□□□ -2.67
CHD1O14646 RNU6-926P-201ENST00000384075 107 ntBASIC-1.61□□□□□ -2.67
CHD1O14646 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.61□□□□□ -2.67
CHD1O14646 AL136370.1-201ENST00000608166 691 ntBASIC-1.61□□□□□ -2.67
CHD1O14646 RNA5SP93-201ENST00000362525 114 ntBASIC-1.62□□□□□ -2.67
CHD1O14646 RNU6-266P-201ENST00000364225 107 ntBASIC-1.62□□□□□ -2.67
CHD1O14646 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.62□□□□□ -2.67
CHD1O14646 SNORD73A-201ENST00000386062 65 ntBASIC-1.62□□□□□ -2.67
CHD1O14646 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.62□□□□□ -2.67
CHD1O14646 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 RNU6-433P-201ENST00000363216 104 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 RNU6-901P-201ENST00000384593 106 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 RNU6-721P-201ENST00000410155 105 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.63□□□□□ -2.67
CHD1O14646 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.63□□□□□ -2.67
CHD1O14646 AC134698.4-201ENST00000523451 826 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 MIR30D-201ENST00000362283 70 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 RNU6-413P-201ENST00000384115 107 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
CHD1O14646 RNU7-138P-201ENST00000459479 64 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 RNU2-69P-201ENST00000516061 100 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 U6.115-201ENST00000636045 103 ntBASIC-1.63□□□□□ -2.67
CHD1O14646 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 SNORA24-201ENST00000384096 131 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 USP9YP16-201ENST00000430287 407 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.64□□□□□ -2.67
CHD1O14646 SNORA25.10-201ENST00000515926 124 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 SNORD38.3-201ENST00000516599 73 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 RNA5SP33-201ENST00000516687 98 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 AC103705.1-201ENST00000619013 241 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 AL158209.2-201ENST00000619266 216 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 SEPT14P19-203ENST00000633205 211 ntBASIC-1.64□□□□□ -2.67
CHD1O14646 SNORD14E-201ENST00000364009 85 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 SNORD116-12-201ENST00000384468 92 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 RNA5SP261-201ENST00000410536 106 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 RNA5SP475-201ENST00000410568 110 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.65□□□□□ -2.67
CHD1O14646 SNORA25.13-201ENST00000516395 103 ntBASIC-1.65□□□□□ -2.67
CHD1O14646 AC011458.1-201ENST00000604034 617 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms