Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC078938.1-201ENST00000620993 318 ntBASIC1.3□□□□□ -2.2
CDX4O14627 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.3□□□□□ -2.2
CDX4O14627 snoU18.1-201ENST00000629629 71 ntBASIC1.3□□□□□ -2.2
CDX4O14627 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.3□□□□□ -2.2
CDX4O14627 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDX4O14627 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDX4O14627 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDX4O14627 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDX4O14627 UBE2WP1-201ENST00000362030 340 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.20-201ENST00000362479 113 ntBASIC1.29□□□□□ -2.2
CDX4O14627 SNORD114-7-201ENST00000362520 77 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.76-201ENST00000362931 109 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.217-201ENST00000364214 105 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.310-201ENST00000365063 113 ntBASIC1.29□□□□□ -2.2
CDX4O14627 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.489-201ENST00000384410 101 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
CDX4O14627 MIR598-201ENST00000384868 97 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU6-763P-201ENST00000390865 106 ntBASIC1.29□□□□□ -2.2
CDX4O14627 SNORA26.5-201ENST00000391215 123 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU6-710P-201ENST00000410424 105 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNA5SP511-201ENST00000410487 115 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RPS20P10-201ENST00000451209 253 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
CDX4O14627 U8.19-201ENST00000459095 133 ntBASIC1.29□□□□□ -2.2
CDX4O14627 snoU13.27-201ENST00000459278 104 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.641-201ENST00000459414 105 ntBASIC1.29□□□□□ -2.2
CDX4O14627 Y_RNA.637-201ENST00000459424 114 ntBASIC1.29□□□□□ -2.2
CDX4O14627 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
CDX4O14627 AC092991.1-201ENST00000477176 376 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU7-172P-201ENST00000517125 64 ntBASIC1.29□□□□□ -2.2
CDX4O14627 RNU7-128P-201ENST00000517247 62 ntBASIC1.29□□□□□ -2.2
CDX4O14627 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
CDX4O14627 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.29□□□□□ -2.2
CDX4O14627 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
CDX4O14627 U6.108-201ENST00000637764 58 ntBASIC1.29□□□□□ -2.2
CDX4O14627 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDX4O14627 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CDX4O14627 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDX4O14627 Y_RNA.36-201ENST00000362602 112 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNU6-117P-201ENST00000365415 107 ntBASIC1.28□□□□□ -2.2
CDX4O14627 Y_RNA.368-201ENST00000365547 113 ntBASIC1.28□□□□□ -2.2
CDX4O14627 Y_RNA.478-201ENST00000384358 107 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNU6-1248P-201ENST00000391096 64 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.28□□□□□ -2.2
CDX4O14627 MIR548J-201ENST00000408833 112 ntBASIC1.28□□□□□ -2.2
CDX4O14627 JTBP1-201ENST00000441314 247 ntBASIC1.28□□□□□ -2.2
CDX4O14627 HSPE1P13-201ENST00000451143 297 ntBASIC1.28□□□□□ -2.2
CDX4O14627 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
CDX4O14627 AC097462.1-201ENST00000514125 324 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNU7-99P-201ENST00000516271 62 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNU6-970P-201ENST00000516312 107 ntBASIC1.28□□□□□ -2.2
CDX4O14627 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
CDX4O14627 MIR151B-201ENST00000584249 96 ntBASIC1.28□□□□□ -2.2
CDX4O14627 AL162424.1-201ENST00000602325 221 ntBASIC1.28□□□□□ -2.2
CDX4O14627 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
CDX4O14627 BX284668.6-201ENST00000606899 438 ntBASIC1.28□□□□□ -2.2
CDX4O14627 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.28□□□□□ -2.2
CDX4O14627 AC004832.4-201ENST00000608952 331 ntBASIC1.28□□□□□ -2.2
CDX4O14627 AC068700.1-201ENST00000565862 3754 ntBASIC1.28□□□□□ -2.21
CDX4O14627 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.28□□□□□ -2.21
CDX4O14627 RNU6-1272P-201ENST00000362776 107 ntBASIC1.27□□□□□ -2.21
CDX4O14627 U8.7-201ENST00000364940 136 ntBASIC1.27□□□□□ -2.21
CDX4O14627 RNA5SP363-201ENST00000365072 115 ntBASIC1.27□□□□□ -2.21
CDX4O14627 SNORA72.4-201ENST00000384174 132 ntBASIC1.27□□□□□ -2.21
CDX4O14627 Y_RNA.456-201ENST00000384232 111 ntBASIC1.27□□□□□ -2.21
CDX4O14627 RNU6-376P-201ENST00000384731 106 ntBASIC1.27□□□□□ -2.21
CDX4O14627 MTCO2P33-201ENST00000402100 465 ntBASIC1.27□□□□□ -2.21
CDX4O14627 Y_RNA.590-201ENST00000410140 107 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.27□□□□□ -2.21
CDX4O14627 BTF3P11-201ENST00000426582 477 ntBASIC1.27□□□□□ -2.21
CDX4O14627 RPS26P45-201ENST00000471748 340 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AC117454.1-201ENST00000491120 168 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX4O14627 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX4O14627 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
CDX4O14627 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AL008718.3-201ENST00000610217 321 ntBASIC1.27□□□□□ -2.21
CDX4O14627 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX4O14627 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.27□□□□□ -2.21
CDX4O14627 AC068647.2-201ENST00000637380 353 ntBASIC1.27□□□□□ -2.21
CDX4O14627 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDX4O14627 RNU6-1080P-201ENST00000383982 107 ntBASIC1.26□□□□□ -2.21
CDX4O14627 RNU6-203P-201ENST00000384038 104 ntBASIC1.26□□□□□ -2.21
CDX4O14627 RNU6-211P-201ENST00000384047 107 ntBASIC1.26□□□□□ -2.21
CDX4O14627 MIR562-201ENST00000384894 95 ntBASIC1.26□□□□□ -2.21
CDX4O14627 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
CDX4O14627 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.26□□□□□ -2.21
CDX4O14627 AL162725.1-201ENST00000435405 301 ntBASIC1.26□□□□□ -2.21
CDX4O14627 AC104332.1-201ENST00000440471 797 ntBASIC1.26□□□□□ -2.21
CDX4O14627 RNU7-141P-201ENST00000459304 62 ntBASIC1.26□□□□□ -2.21
CDX4O14627 RNU6-1278P-201ENST00000516130 107 ntBASIC1.26□□□□□ -2.21
CDX4O14627 Y_RNA.679-201ENST00000516416 91 ntBASIC1.26□□□□□ -2.21
CDX4O14627 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.26□□□□□ -2.21
CDX4O14627 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDX4O14627 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.82-201ENST00000363000 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.92-201ENST00000363043 102 ntBASIC1.25□□□□□ -2.21
CDX4O14627 Y_RNA.235-201ENST00000364412 102 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms