Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.04□□□□□ -2.4
UPK2O00526 AC022709.1-201ENST00000615967 87 ntBASIC0.04□□□□□ -2.4
UPK2O00526 AC007742.2-201ENST00000618226 398 ntBASIC0.04□□□□□ -2.4
UPK2O00526 Y_RNA.72-201ENST00000362894 103 ntBASIC0.03□□□□□ -2.4
UPK2O00526 RNU6-593P-201ENST00000364716 112 ntBASIC0.03□□□□□ -2.4
UPK2O00526 MIR181A1-201ENST00000385026 110 ntBASIC0.03□□□□□ -2.4
UPK2O00526 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.03□□□□□ -2.4
UPK2O00526 FCF1P4-201ENST00000448326 183 ntBASIC0.03□□□□□ -2.4
UPK2O00526 RNU7-62P-201ENST00000458856 62 ntBASIC0.03□□□□□ -2.4
UPK2O00526 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
UPK2O00526 RNU6-1213P-201ENST00000517075 94 ntBASIC0.03□□□□□ -2.4
UPK2O00526 MIR2355-201ENST00000517199 87 ntBASIC0.03□□□□□ -2.4
UPK2O00526 MIR4264-201ENST00000583520 66 ntBASIC0.03□□□□□ -2.4
UPK2O00526 uc_338.4-201ENST00000616635 176 ntBASIC0.03□□□□□ -2.4
UPK2O00526 AC087588.2-201ENST00000617667 426 ntBASIC0.03□□□□□ -2.4
UPK2O00526 RNU6-1209P-201ENST00000363655 107 ntBASIC0.02□□□□□ -2.41
UPK2O00526 RNU6-1323P-201ENST00000384025 107 ntBASIC0.02□□□□□ -2.41
UPK2O00526 Y_RNA.450-201ENST00000384198 113 ntBASIC0.02□□□□□ -2.41
UPK2O00526 SNORA69.1-201ENST00000390904 137 ntBASIC0.02□□□□□ -2.41
UPK2O00526 MIR938-201ENST00000401216 83 ntBASIC0.02□□□□□ -2.41
UPK2O00526 AL590004.1-201ENST00000405321 300 ntBASIC0.02□□□□□ -2.41
UPK2O00526 Y_RNA.592-201ENST00000410274 109 ntBASIC0.02□□□□□ -2.41
UPK2O00526 RNA5SP118-201ENST00000410385 109 ntBASIC0.02□□□□□ -2.41
UPK2O00526 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.02□□□□□ -2.41
UPK2O00526 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.02□□□□□ -2.41
UPK2O00526 RNU6-470P-201ENST00000515954 104 ntBASIC0.02□□□□□ -2.41
UPK2O00526 Y_RNA.676-201ENST00000516393 96 ntBASIC0.02□□□□□ -2.41
UPK2O00526 AC024405.2-202ENST00000532731 184 ntBASIC0.02□□□□□ -2.41
UPK2O00526 PISRT1.1-201ENST00000616930 107 ntBASIC0.02□□□□□ -2.41
UPK2O00526 RNY3P11-201ENST00000364153 102 ntBASIC0.01□□□□□ -2.41
UPK2O00526 Y_RNA.796-201ENST00000364268 102 ntBASIC0.01□□□□□ -2.41
UPK2O00526 Y_RNA.799-201ENST00000364992 102 ntBASIC0.01□□□□□ -2.41
UPK2O00526 Y_RNA.341-201ENST00000365341 102 ntBASIC0.01□□□□□ -2.41
UPK2O00526 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
UPK2O00526 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
UPK2O00526 RNY1P14-201ENST00000384426 108 ntBASIC0.01□□□□□ -2.41
UPK2O00526 SNORD72-201ENST00000390994 80 ntBASIC0.01□□□□□ -2.41
UPK2O00526 MIR1278-201ENST00000408753 81 ntBASIC0.01□□□□□ -2.41
UPK2O00526 RNU7-169P-201ENST00000459456 61 ntBASIC0.01□□□□□ -2.41
UPK2O00526 RPS29P25-201ENST00000481709 171 ntBASIC0.01□□□□□ -2.41
UPK2O00526 RPL23AP54-201ENST00000495129 419 ntBASIC0.01□□□□□ -2.41
UPK2O00526 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.01□□□□□ -2.41
UPK2O00526 AC069113.3-201ENST00000521019 150 ntBASIC0.01□□□□□ -2.41
UPK2O00526 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.01□□□□□ -2.41
UPK2O00526 AC005899.2-201ENST00000584353 90 ntBASIC0.01□□□□□ -2.41
UPK2O00526 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORD118-201ENST00000363593 134 ntBASIC0□□□□□ -2.41
UPK2O00526 Y_RNA.194-201ENST00000363985 102 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORA8.2-201ENST00000384372 139 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORA75.4-201ENST00000391278 119 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORD100-201ENST00000408573 76 ntBASIC0□□□□□ -2.41
UPK2O00526 RNU6-847P-201ENST00000411115 108 ntBASIC0□□□□□ -2.41
UPK2O00526 MCFD2P1-201ENST00000417812 300 ntBASIC0□□□□□ -2.41
UPK2O00526 AC107399.1-201ENST00000451226 265 ntBASIC0□□□□□ -2.41
UPK2O00526 AC091959.1-201ENST00000495857 238 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORA18.4-201ENST00000516440 124 ntBASIC0□□□□□ -2.41
UPK2O00526 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
UPK2O00526 SNORA4-201ENST00000584302 138 ntBASIC0□□□□□ -2.41
UPK2O00526 AC008507.4-201ENST00000585464 127 ntBASIC0□□□□□ -2.41
UPK2O00526 AC087685.1-201ENST00000587507 141 ntBASIC0□□□□□ -2.41
UPK2O00526 AC010332.2-201ENST00000613083 1904 ntBASIC0□□□□□ -2.41
UPK2O00526 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 SNORA1.2-201ENST00000365189 134 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 MIR625-201ENST00000385047 85 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 MIR518E-201ENST00000385252 88 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 RNU7-102P-201ENST00000458948 62 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 RNU2-13P-201ENST00000515909 113 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 SCARNA8-201ENST00000515924 131 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 RNU7-116P-201ENST00000516940 62 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 EIF1P4-201ENST00000572664 335 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 AC090897.1-201ENST00000580909 226 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.01□□□□□ -2.41
UPK2O00526 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.01□□□□□ -2.41
UPK2O00526 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 AC010487.4-201ENST00000637027 61 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
UPK2O00526 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 U8.7-201ENST00000364940 136 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 RNU6-364P-201ENST00000384387 107 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 AL603910.2-201ENST00000407268 136 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR1287-201ENST00000408492 90 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR3678-201ENST00000578455 94 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR4659A-201ENST00000580269 81 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 AC005730.3-201ENST00000583067 366 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
UPK2O00526 AC023932.2-201ENST00000603176 175 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 AP003357.1-201ENST00000604497 148 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR6740-201ENST00000618268 113 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 MIR6515-201ENST00000619843 57 ntBASIC-0.02□□□□□ -2.41
UPK2O00526 RNU4-67P-201ENST00000364569 141 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms