Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RPL30P16-201ENST00000419341 429 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 MTATP6P17-201ENST00000431030 672 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 GPR143P-201ENST00000434155 205 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 AC104576.1-201ENST00000524225 88 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 AC005972.2-201ENST00000604690 348 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 AL133173.2-201ENST00000614270 90 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 AL163152.1-201ENST00000642001 374 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 SNORD50.1-201ENST00000362987 71 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 SNORD114-25-201ENST00000363742 72 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-24P-201ENST00000384440 107 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-913P-201ENST00000390913 95 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-325P-201ENST00000411132 105 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.38□□□□□ -2.63
HMGN4O00479 SNORA13-201ENST00000458790 133 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 Vault.3-201ENST00000516676 95 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 AL158063.1-201ENST00000615349 536 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 RNU6-489P-201ENST00000618289 107 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 AC099654.13-201ENST00000639774 207 ntBASIC-1.38□□□□□ -2.63
HMGN4O00479 MIR410-201ENST00000362222 80 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 RNA5SP245-201ENST00000364239 121 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 RNU6-660P-201ENST00000364566 109 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 MIR587-201ENST00000384845 96 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 SNORD41.1-201ENST00000391000 69 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 AL031667.1-201ENST00000440222 725 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 RNU6-437P-201ENST00000459408 95 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 RNU6-958P-201ENST00000516995 106 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 AL137161.1-201ENST00000532231 390 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 MIR4491-201ENST00000581087 68 ntBASIC-1.39□□□□□ -2.63
HMGN4O00479 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
HMGN4O00479 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 RNU6-30P-201ENST00000384561 107 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
HMGN4O00479 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.4□□□□□ -2.63
HMGN4O00479 HMGN1P33-201ENST00000432945 451 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 AL445193.1-201ENST00000441183 141 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 snoU13.19-201ENST00000459148 104 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 AC024405.2-202ENST00000532731 184 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.4□□□□□ -2.63
HMGN4O00479 AL360085.1-201ENST00000604713 532 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 AC109347.2-201ENST00000610220 349 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 AC099654.12-201ENST00000639868 649 ntBASIC-1.4□□□□□ -2.63
HMGN4O00479 SNORA72.6-201ENST00000384520 129 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 U8.15-201ENST00000390947 134 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 RNU2-29P-201ENST00000410423 189 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 MTND2P18-201ENST00000419962 1030 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 AC010655.3-201ENST00000478818 450 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 RN7SKP19-201ENST00000516016 252 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 AC073648.5-201ENST00000603502 305 ntBASIC-1.41□□□□□ -2.64
HMGN4O00479 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 RNU6-454P-201ENST00000364292 107 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 RNU4-16P-201ENST00000364737 141 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 RNU6-108P-201ENST00000365558 107 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 SNORA72-201ENST00000384339 132 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 MIR9-2-201ENST00000384838 87 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 MIR1-2-201ENST00000384961 85 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 MTCO1P29-201ENST00000496868 288 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 AC011458.1-201ENST00000604034 617 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 AL512506.1-201ENST00000613918 449 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 AL391262.2-201ENST00000622466 494 ntBASIC-1.42□□□□□ -2.64
HMGN4O00479 RNU6-502P-201ENST00000362419 108 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.43□□□□□ -2.64
HMGN4O00479 RNA5SP67-201ENST00000516422 131 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 RNA5SP395-201ENST00000516567 118 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 RNU7-188P-201ENST00000517063 64 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 RNU7-161P-201ENST00000517289 62 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 AC022878.1-201ENST00000530684 149 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 MIR4423-201ENST00000580922 80 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 AC011373.1-201ENST00000607270 237 ntBASIC-1.43□□□□□ -2.64
HMGN4O00479 SNORD115-34-201ENST00000362441 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-12-201ENST00000362583 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-29-201ENST00000362834 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-9-201ENST00000362912 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-21-201ENST00000362963 81 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-14-201ENST00000363090 81 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-13-201ENST00000363358 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-41-201ENST00000363608 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-11-201ENST00000363616 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-5-201ENST00000363633 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-39-201ENST00000363694 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-4-201ENST00000363810 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-16-201ENST00000363887 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-6-201ENST00000363942 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-42-201ENST00000364273 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 RNA5SP192-201ENST00000364404 120 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 RNU4-75P-201ENST00000364621 146 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-15-201ENST00000364809 81 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-1-201ENST00000364961 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-26-201ENST00000365067 82 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms