Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
O00370 RNU6-1160P-201ENST00000384546 104 ntBASIC1.31□□□□□ -2.2
O00370 AL731563.1-201ENST00000442202 214 ntBASIC1.31□□□□□ -2.2
O00370 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
O00370 RNU7-116P-201ENST00000516940 62 ntBASIC1.31□□□□□ -2.2
O00370 RNU2-31P-201ENST00000516954 155 ntBASIC1.31□□□□□ -2.2
O00370 AL358944.1-201ENST00000528537 144 ntBASIC1.31□□□□□ -2.2
O00370 MIR7111-201ENST00000619751 72 ntBASIC1.31□□□□□ -2.2
O00370 RNU6-199P-201ENST00000362954 107 ntBASIC1.3□□□□□ -2.2
O00370 Y_RNA.276-201ENST00000364732 109 ntBASIC1.3□□□□□ -2.2
O00370 RNU6-392P-201ENST00000364926 101 ntBASIC1.3□□□□□ -2.2
O00370 SNORA72.4-201ENST00000384174 132 ntBASIC1.3□□□□□ -2.2
O00370 Y_RNA.459-201ENST00000384251 102 ntBASIC1.3□□□□□ -2.2
O00370 RNU6-662P-201ENST00000384253 104 ntBASIC1.3□□□□□ -2.2
O00370 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
O00370 SNORA26.5-201ENST00000391215 123 ntBASIC1.3□□□□□ -2.2
O00370 MIR891A-201ENST00000401237 79 ntBASIC1.3□□□□□ -2.2
O00370 MIR1278-201ENST00000408753 81 ntBASIC1.3□□□□□ -2.2
O00370 BTF3P11-201ENST00000426582 477 ntBASIC1.3□□□□□ -2.2
O00370 SNRPGP10-201ENST00000432323 225 ntBASIC1.3□□□□□ -2.2
O00370 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
O00370 RNU7-115P-201ENST00000516433 55 ntBASIC1.3□□□□□ -2.2
O00370 DEFB108E-201ENST00000524692 240 ntBASIC1.3□□□□□ -2.2
O00370 AL442663.2-201ENST00000554385 511 ntBASIC1.3□□□□□ -2.2
O00370 AC127455.1-201ENST00000565496 145 ntBASIC1.3□□□□□ -2.2
O00370 Y_RNA.84-201ENST00000363011 104 ntBASIC1.29□□□□□ -2.2
O00370 Y_RNA.269-201ENST00000364685 89 ntBASIC1.29□□□□□ -2.2
O00370 RNU6-1323P-201ENST00000384025 107 ntBASIC1.29□□□□□ -2.2
O00370 MIR802-201ENST00000390235 94 ntBASIC1.29□□□□□ -2.2
O00370 RNU6-763P-201ENST00000390865 106 ntBASIC1.29□□□□□ -2.2
O00370 RNU6-131P-201ENST00000391144 107 ntBASIC1.29□□□□□ -2.2
O00370 AL078595.1-201ENST00000404458 226 ntBASIC1.29□□□□□ -2.2
O00370 HMGN1P7-201ENST00000491722 313 ntBASIC1.29□□□□□ -2.2
O00370 AC091959.1-201ENST00000495857 238 ntBASIC1.29□□□□□ -2.2
O00370 CYCTP-201ENST00000504253 315 ntBASIC1.29□□□□□ -2.2
O00370 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
O00370 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
O00370 AC005357.1-201ENST00000588399 301 ntBASIC1.29□□□□□ -2.2
O00370 AP003357.1-201ENST00000604497 148 ntBASIC1.29□□□□□ -2.2
O00370 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
O00370 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
O00370 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
O00370 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
O00370 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
O00370 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
O00370 Y_RNA.203-201ENST00000364106 102 ntBASIC1.28□□□□□ -2.2
O00370 MIR516B2-201ENST00000385190 85 ntBASIC1.28□□□□□ -2.2
O00370 SNORA36B-201ENST00000410438 131 ntBASIC1.28□□□□□ -2.2
O00370 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.28□□□□□ -2.2
O00370 AC136628.3-201ENST00000521868 290 ntBASIC1.28□□□□□ -2.2
O00370 AL360085.1-201ENST00000604713 532 ntBASIC1.28□□□□□ -2.2
O00370 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.28□□□□□ -2.2
O00370 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
O00370 MIRLET7C-201ENST00000362160 84 ntBASIC1.27□□□□□ -2.21
O00370 Y_RNA.136-201ENST00000363444 102 ntBASIC1.27□□□□□ -2.21
O00370 RNU6-437P-201ENST00000459408 95 ntBASIC1.27□□□□□ -2.21
O00370 TRBVB-201ENST00000477100 408 ntBASIC1.27□□□□□ -2.21
O00370 RN7SKP88-201ENST00000516847 250 ntBASIC1.27□□□□□ -2.21
O00370 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.27□□□□□ -2.21
O00370 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
O00370 7SK.8-201ENST00000612110 250 ntBASIC1.27□□□□□ -2.21
O00370 7SK.11-201ENST00000615477 250 ntBASIC1.27□□□□□ -2.21
O00370 7SK.13-201ENST00000622040 250 ntBASIC1.27□□□□□ -2.21
O00370 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
O00370 Y_RNA.118-201ENST00000363300 101 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-1205P-201ENST00000363625 106 ntBASIC1.26□□□□□ -2.21
O00370 SNORA63C-201ENST00000364578 129 ntBASIC1.26□□□□□ -2.21
O00370 Y_RNA.293-201ENST00000364908 93 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
O00370 Y_RNA.461-201ENST00000384263 103 ntBASIC1.26□□□□□ -2.21
O00370 Y_RNA.508-201ENST00000384502 114 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-1109P-201ENST00000391187 107 ntBASIC1.26□□□□□ -2.21
O00370 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
O00370 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.26□□□□□ -2.21
O00370 MTND4LP30-201ENST00000454092 297 ntBASIC1.26□□□□□ -2.21
O00370 U8.19-201ENST00000459095 133 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-322P-201ENST00000516010 103 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-917P-201ENST00000516294 104 ntBASIC1.26□□□□□ -2.21
O00370 RNU6-1338P-201ENST00000516328 91 ntBASIC1.26□□□□□ -2.21
O00370 AL512310.8-201ENST00000550183 120 ntBASIC1.26□□□□□ -2.21
O00370 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
O00370 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
O00370 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
O00370 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
O00370 RNU6-899P-201ENST00000363947 107 ntBASIC1.25□□□□□ -2.21
O00370 snoU2-30.1-201ENST00000365012 70 ntBASIC1.25□□□□□ -2.21
O00370 Y_RNA.355-201ENST00000365462 98 ntBASIC1.25□□□□□ -2.21
O00370 RNU6-326P-201ENST00000365480 107 ntBASIC1.25□□□□□ -2.21
O00370 MIR522-201ENST00000385071 87 ntBASIC1.25□□□□□ -2.21
O00370 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
O00370 RNU6-1203P-201ENST00000410703 110 ntBASIC1.25□□□□□ -2.21
O00370 SNORD45.4-201ENST00000516629 73 ntBASIC1.25□□□□□ -2.21
O00370 Y_RNA.714-201ENST00000517065 90 ntBASIC1.25□□□□□ -2.21
O00370 RPL23AP91-201ENST00000569211 455 ntBASIC1.25□□□□□ -2.21
O00370 AC091895.1-201ENST00000624494 256 ntBASIC1.25□□□□□ -2.21
O00370 RNU6-1272P-201ENST00000362776 107 ntBASIC1.24□□□□□ -2.21
O00370 RNU6-1309P-201ENST00000363305 108 ntBASIC1.24□□□□□ -2.21
O00370 Y_RNA.145-201ENST00000363527 102 ntBASIC1.24□□□□□ -2.21
O00370 RNU6-1209P-201ENST00000363655 107 ntBASIC1.24□□□□□ -2.21
O00370 Y_RNA.224-201ENST00000364308 111 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms