Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
AP3B1O00203 MIR377-201ENST00000362145 69 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 MIR18A-201ENST00000362310 71 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 Y_RNA.376-201ENST00000365638 108 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 MT-TN-201ENST00000387400 73 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 U8.17-201ENST00000391292 132 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 RNU6-1156P-201ENST00000410365 100 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 MTCO3P10-201ENST00000455912 772 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.24□□□□□ -2.37
AP3B1O00203 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
AP3B1O00203 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 Y_RNA.203-201ENST00000364106 102 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 RNU6-442P-201ENST00000383968 104 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 RNU6-708P-201ENST00000384217 107 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 SNORA51.10-201ENST00000384418 136 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 Y_RNA.537-201ENST00000384626 109 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 SNORD78.2-201ENST00000391076 69 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 AL590004.1-201ENST00000405321 300 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.23□□□□□ -2.37
AP3B1O00203 AC069439.1-201ENST00000494739 167 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 RNU6-977P-201ENST00000516411 103 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 RNU7-116P-201ENST00000516940 62 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 MIR4771-2-201ENST00000577758 74 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 MIR4771-1-201ENST00000582617 74 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 MTND1P7-201ENST00000632801 297 ntBASIC0.23□□□□□ -2.37
AP3B1O00203 RNU6-125P-201ENST00000384505 107 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 RNU6-710P-201ENST00000410424 105 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 MCFD2P1-201ENST00000417812 300 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.22□□□□□ -2.37
AP3B1O00203 RNU6-470P-201ENST00000515954 104 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 RNA5SP436-201ENST00000516020 115 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 MIR3612-201ENST00000579753 87 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 MIR4659A-201ENST00000580269 81 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 POLR3GP1-201ENST00000594073 261 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 AC022441.3-201ENST00000605737 136 ntBASIC0.22□□□□□ -2.37
AP3B1O00203 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 RNU6-268P-201ENST00000364174 107 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 Y_RNA.230-201ENST00000364348 109 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 Y_RNA.310-201ENST00000365063 113 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 RNU6-934P-201ENST00000365154 107 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 MIR802-201ENST00000390235 94 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
AP3B1O00203 MIR1278-201ENST00000408753 81 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 PRDX4P1-201ENST00000507189 574 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 AC024405.2-202ENST00000532731 184 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 AC080013.6-201ENST00000606185 215 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 MIR4791-201ENST00000607666 84 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 JPX_2.1-201ENST00000614161 69 ntBASIC0.21□□□□□ -2.38
AP3B1O00203 RNU6-1209P-201ENST00000363655 107 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 Y_RNA.341-201ENST00000365341 102 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 MIR518E-201ENST00000385252 88 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 MIR1277-201ENST00000408536 78 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 Y_RNA.646-201ENST00000410980 101 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 AC090844.1-201ENST00000422019 156 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 MTND1P2-201ENST00000430604 821 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 RPL23AP54-201ENST00000495129 419 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 RNU7-30P-201ENST00000516835 62 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.2□□□□□ -2.38
AP3B1O00203 AP003357.1-201ENST00000604497 148 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 AC084782.3-201ENST00000612282 578 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 AC002553.4-201ENST00000616896 331 ntBASIC0.2□□□□□ -2.38
AP3B1O00203 RNU6-623P-201ENST00000363143 105 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 Y_RNA.796-201ENST00000364268 102 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 Y_RNA.799-201ENST00000364992 102 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 SNORD72-201ENST00000390994 80 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 RNU6-679P-201ENST00000391003 106 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 Y_RNA.599-201ENST00000410489 109 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 AC096644.2-201ENST00000429278 159 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 RNU7-4P-201ENST00000516961 62 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 RNU6-264P-201ENST00000517134 104 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 AC144568.1-201ENST00000520139 137 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.19□□□□□ -2.38
AP3B1O00203 MIR4804-201ENST00000581683 73 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 AP000753.3-201ENST00000604083 169 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 LARP7P1-201ENST00000605576 316 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 uc_338.6-201ENST00000613544 171 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 AC092634.7-201ENST00000621022 103 ntBASIC0.19□□□□□ -2.38
AP3B1O00203 RNU6-1175P-201ENST00000365200 107 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 Y_RNA.456-201ENST00000384232 111 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 RNU6-1215P-201ENST00000384441 102 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 RNU6-310P-201ENST00000384655 107 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 Y_RNA.605-201ENST00000410577 105 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 RNU6-370P-201ENST00000411008 104 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 AF228730.4-201ENST00000421457 183 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
AP3B1O00203 RNU2-13P-201ENST00000515909 113 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 RN7SKP295-201ENST00000517264 153 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 MIR5188-201ENST00000583467 113 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 AC008507.4-201ENST00000585464 127 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 DEFB117-201ENST00000602356 141 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 AC020891.4-201ENST00000605745 93 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 U6.92-201ENST00000636464 89 ntBASIC0.18□□□□□ -2.38
AP3B1O00203 U8.7-201ENST00000364940 136 ntBASIC0.17□□□□□ -2.38
AP3B1O00203 Y_RNA.318-201ENST00000365131 97 ntBASIC0.17□□□□□ -2.38
AP3B1O00203 SNORA1.2-201ENST00000365189 134 ntBASIC0.17□□□□□ -2.38
AP3B1O00203 RNU6-890P-201ENST00000384121 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms