Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.380-201ENST00000365663 111 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.418-201ENST00000384029 102 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.569-201ENST00000384749 103 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 COX6CP14-201ENST00000469580 174 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 RNU6-191P-201ENST00000516295 94 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 RNY3P15-201ENST00000516297 97 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 AC131281.1-201ENST00000522984 164 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 SNORA72.4-201ENST00000384174 132 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.455-201ENST00000384230 98 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 MIR1278-201ENST00000408753 81 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 SNORA36B-201ENST00000410438 131 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 RNU6-121P-201ENST00000410525 99 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 ELOCP20-201ENST00000422460 345 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 AC098869.1-201ENST00000481627 292 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.701-201ENST00000516812 110 ntBASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
NPIPA3F8WFD2 RNU6-770P-201ENST00000363929 105 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.202-201ENST00000364083 110 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.210-201ENST00000364161 110 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.214-201ENST00000364201 112 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 SNORA26.5-201ENST00000391215 123 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 MTCO2P33-201ENST00000402100 465 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 RNU6-437P-201ENST00000459408 95 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 MRPS35P2-201ENST00000508242 191 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 RNU6-764P-201ENST00000516396 105 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 SNORD111.1-201ENST00000516421 86 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 AC090142.3-201ENST00000519012 385 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 AL356055.1-201ENST00000602528 446 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 AL096861.1-201ENST00000610899 123 ntBASIC1.08□□□□□ -2.24
NPIPA3F8WFD2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.19-201ENST00000362462 99 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 SNORD14E-201ENST00000364009 85 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 RNU6-806P-201ENST00000365147 105 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 AC117470.1-201ENST00000381974 330 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 MIR215-201ENST00000384858 110 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 HMGN2P32-201ENST00000444648 269 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 SNORA18.7-201ENST00000516910 131 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 AC113195.1-201ENST00000579952 141 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 MIR4680-201ENST00000580906 66 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.07□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.581-201ENST00000391017 97 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 MTCO1P5-201ENST00000433573 344 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 RNU6-1137P-201ENST00000517073 99 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 RPL23AP91-201ENST00000569211 455 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AL512605.2-201ENST00000592972 256 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AL355297.3-201ENST00000604082 446 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
NPIPA3F8WFD2 snoU2_19.2-201ENST00000363024 80 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR520C-201ENST00000385005 87 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR518E-201ENST00000385252 88 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 RNU6-763P-201ENST00000390865 106 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 RPL21P38-201ENST00000418090 167 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR2681-201ENST00000581814 105 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR3192-201ENST00000584920 77 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 AC005357.1-201ENST00000588399 301 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 AC007742.2-201ENST00000618226 398 ntBASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NPIPA3F8WFD2 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms