Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC090049.2-201ENST00000550377 109 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.16-201ENST00000362421 102 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 SNORD33-201ENST00000362761 85 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.64-201ENST00000362845 102 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.153-201ENST00000363615 91 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU4-50P-201ENST00000364361 141 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.431-201ENST00000384086 102 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.460-201ENST00000384255 102 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-21P-201ENST00000384710 107 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR489-201ENST00000384923 84 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR548P-201ENST00000408336 84 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR548J-201ENST00000408833 112 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 U8.19-201ENST00000459095 133 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 NDUFA4P2-201ENST00000489989 244 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 SNORA31.2-201ENST00000516019 134 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-475P-201ENST00000516073 104 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-191P-201ENST00000516295 94 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 RNU7-115P-201ENST00000516433 55 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.701-201ENST00000516812 110 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR4680-201ENST00000580906 66 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR4762-201ENST00000585261 75 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 POLR3GP1-201ENST00000594073 261 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 AL513534.2-201ENST00000603836 250 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
TRAV40A0A0B4J280 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-797P-201ENST00000363101 109 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.128-201ENST00000363391 112 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-833P-201ENST00000363486 107 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.210-201ENST00000364161 110 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.222-201ENST00000364264 102 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 U8.5-201ENST00000364528 136 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 SNORA72-201ENST00000384339 132 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.512-201ENST00000384518 102 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-939P-201ENST00000384634 107 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.541-201ENST00000384640 113 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-910P-201ENST00000390844 107 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 SNORD115-46-201ENST00000390982 71 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 MIR891A-201ENST00000401237 79 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 MIR1252-201ENST00000408861 65 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 MTCYBP6-201ENST00000441810 138 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 LINC01399-202ENST00000458450 244 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU7-141P-201ENST00000459304 62 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 OR2A41P-201ENST00000473586 105 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RPL23AP54-201ENST00000495129 419 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-764P-201ENST00000516396 105 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 SNORD45.4-201ENST00000516629 73 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 AL358944.1-201ENST00000528537 144 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 AC113195.1-201ENST00000579952 141 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 AL022345.2-201ENST00000606307 135 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 GHRLOS.1-201ENST00000610995 70 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 MIR376A1-201ENST00000616574 68 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 AC134503.1-201ENST00000633048 54 ntBASIC0.74□□□□□ -2.29
TRAV40A0A0B4J280 SNORA25.3-201ENST00000363205 127 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-1209P-201ENST00000363655 107 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 SNORA2.2-201ENST00000365473 135 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-1323P-201ENST00000384025 107 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-763P-201ENST00000390865 106 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 MTCO2P33-201ENST00000402100 465 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 MTCO1P5-201ENST00000433573 344 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 POLR2KP2-201ENST00000438155 177 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.637-201ENST00000459424 114 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 CYCTP-201ENST00000504253 315 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 AC131281.1-201ENST00000522984 164 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 AP003357.1-201ENST00000604497 148 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 MIR548AY-201ENST00000617669 107 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 AL138825.1-201ENST00000618587 192 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.73□□□□□ -2.29
TRAV40A0A0B4J280 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.183-201ENST00000363882 113 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.203-201ENST00000364106 102 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.336-201ENST00000365307 109 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 SNORA72.4-201ENST00000384174 132 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.456-201ENST00000384232 111 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 SNORA25-201ENST00000384384 134 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 MIR562-201ENST00000384894 95 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 MIR570-201ENST00000384917 97 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 SNORD72-201ENST00000390994 80 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AL603910.2-201ENST00000407268 136 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-383P-201ENST00000410864 94 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AC113618.1-201ENST00000416747 285 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms