Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 MIR3612-201ENST00000579753 87 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 MIR6128-201ENST00000615528 109 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 AC004467.1-201ENST00000615678 330 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 AC240442.1-201ENST00000616055 283 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 MIR6718-201ENST00000616153 80 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 MIR520F-201ENST00000384824 87 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU6-700P-201ENST00000391043 107 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU6-131P-201ENST00000391144 107 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU6-1199P-201ENST00000411249 104 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU7-87P-201ENST00000459343 62 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 MTND5P5-201ENST00000503764 376 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU2-13P-201ENST00000515909 113 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.688-201ENST00000516565 95 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RNU6-273P-201ENST00000516937 96 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 MIR2909-201ENST00000617113 69 ntBASIC0.09□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.51-201ENST00000362725 102 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNU6-396P-201ENST00000365369 105 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.473-201ENST00000384333 102 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 SNORA72-201ENST00000384339 132 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNU2-54P-201ENST00000410299 190 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 SNORD83.1-201ENST00000411362 77 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 MTND3P21-201ENST00000433774 331 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 MTND1P29-201ENST00000448112 647 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 SNRPGP12-201ENST00000449481 213 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 U8.19-201ENST00000459095 133 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RPS29P25-201ENST00000481709 171 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 SNORA25.12-201ENST00000516202 82 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNU6-977P-201ENST00000516411 103 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 MIR548AO-201ENST00000579992 96 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 MIR4804-201ENST00000581683 73 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 AC005972.2-201ENST00000604690 348 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 AP000770.2-201ENST00000623694 100 ntBASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.08□□□□□ -2.4
USH1CQ9Y6N9 RNA5SP517-201ENST00000364724 117 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.537-201ENST00000384626 109 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.594-201ENST00000410373 140 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 AC074085.1-201ENST00000413598 418 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 MTND2P22-201ENST00000444325 1033 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 RNU7-56P-201ENST00000458744 62 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 HMGN1P10-201ENST00000474557 553 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 RNU6-408P-201ENST00000515910 100 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 RNU6-966P-201ENST00000516479 104 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 RNU6-1016P-201ENST00000516689 94 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 AC109635.3-201ENST00000529536 185 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 AC022523.2-201ENST00000561045 150 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 LARP7P1-201ENST00000605576 316 ntBASIC0.07□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.41-201ENST00000362646 102 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 RNU6-1013P-201ENST00000384180 107 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 SNORD116-1-201ENST00000384335 95 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 RNU6-125P-201ENST00000384505 107 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 MIR570-201ENST00000384917 97 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 RNU6-679P-201ENST00000391003 106 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 AL353997.1-201ENST00000432936 108 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 CHEK2P4-201ENST00000450340 246 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 AC093534.1-201ENST00000504977 132 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 RNU6-436P-201ENST00000516171 114 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 MIR2355-201ENST00000517199 87 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 MIR4790-201ENST00000577799 79 ntBASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.06□□□□□ -2.4
USH1CQ9Y6N9 SNORD118-201ENST00000363593 134 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.157-201ENST00000363638 102 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 RNY4P14-201ENST00000363656 96 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 RNU6-593P-201ENST00000364716 112 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 RNU6-934P-201ENST00000365154 107 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 SNORD100-201ENST00000408573 76 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 BTF3P11-201ENST00000426582 477 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 RNU6-506P-201ENST00000516553 94 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 AC020891.4-201ENST00000605745 93 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 Pinc.1-201ENST00000616452 154 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 MTND1P7-201ENST00000632801 297 ntBASIC0.05□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.402-201ENST00000383972 102 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 RNU6-1323P-201ENST00000384025 107 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 U8.17-201ENST00000391292 132 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 MIR548K-201ENST00000408406 116 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 RNA5SP118-201ENST00000410385 109 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 RNU6-1050P-201ENST00000410388 107 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 SNORA40.8-201ENST00000411034 126 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 SNORD71-201ENST00000411292 86 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AL139396.1-201ENST00000421137 167 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AC015818.7-201ENST00000428754 109 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms