Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDHA9Q9Y5H5 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
PCDHA9Q9Y5H5 MIR6844-201ENST00000637122 62 ntBASIC2.4□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-978P-201ENST00000364371 103 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 AL034345.1-201ENST00000407768 123 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 RNU2-7P-201ENST00000410794 178 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP184-201ENST00000411071 108 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 RPL30P13-201ENST00000418873 348 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 STAG3L5P-204ENST00000443759 179 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-504P-201ENST00000516568 104 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP481-201ENST00000516814 122 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 MIR3910-1-201ENST00000580936 111 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
PCDHA9Q9Y5H5 ZNF702P-202ENST00000434269 1966 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-199P-201ENST00000362954 107 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 Y_RNA.91-201ENST00000363042 107 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-525P-201ENST00000363685 104 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 SNORA5B-201ENST00000363786 132 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNU4-11P-201ENST00000365287 132 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD72-201ENST00000390994 80 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 TMSB4XP3-201ENST00000445144 114 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 AP001485.1-201ENST00000604799 199 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 MIR3658-201ENST00000636291 56 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
PCDHA9Q9Y5H5 SNORA25.7-201ENST00000364375 127 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD50B-201ENST00000364995 70 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD37.2-201ENST00000391075 66 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 SNORA75.5-201ENST00000391291 81 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 MIR513C-201ENST00000401352 84 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP100-201ENST00000410903 110 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP59-201ENST00000410922 110 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 AC055731.1-201ENST00000474387 401 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 AC112693.2-201ENST00000556538 232 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 AC120024.3-201ENST00000603167 156 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PCDHA9Q9Y5H5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD14E-201ENST00000364009 85 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-818P-201ENST00000364837 108 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD24-201ENST00000383884 75 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 Y_RNA.568-201ENST00000384742 113 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 MIR569-201ENST00000385228 96 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 AL158823.1-201ENST00000418441 478 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 HSPE1P9-201ENST00000440046 311 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 RPL23AP63-201ENST00000498752 471 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 SNORD45.4-201ENST00000516629 73 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP437-201ENST00000517249 129 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 AC027279.3-201ENST00000625055 122 ntBASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHA9Q9Y5H5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 MIR21-201ENST00000362134 72 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-442P-201ENST00000383968 104 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 MIR802-201ENST00000390235 94 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 HMGN2P32-201ENST00000444648 269 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
PCDHA9Q9Y5H5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 MIRLET7C-201ENST00000362160 84 ntBASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 SNORA4.2-201ENST00000365313 147 ntBASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 Y_RNA.497-201ENST00000384447 98 ntBASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 CYCTP-201ENST00000504253 315 ntBASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHA9Q9Y5H5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-888P-201ENST00000363010 101 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 AL365205.2-201ENST00000594586 68 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 MIR6817-201ENST00000615588 66 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 AC132825.6-201ENST00000638861 357 ntBASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHA9Q9Y5H5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms