Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC022441.3-201ENST00000605737 136 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.148-201ENST00000363557 117 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.191-201ENST00000363972 113 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.230-201ENST00000364348 109 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.329-201ENST00000365209 107 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 SNORD114-22-201ENST00000365423 72 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 RNU6-890P-201ENST00000384121 107 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 SNORA2B-201ENST00000384583 137 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 SNORD105-201ENST00000386910 85 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 MTCO2P27-201ENST00000420740 428 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.37□□□□□ -2.35
LRRC42Q9Y546 MTND1P2-201ENST00000430604 821 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 RNU7-169P-201ENST00000459456 61 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.37□□□□□ -2.35
LRRC42Q9Y546 RNU6-264P-201ENST00000517134 104 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 MIR4659A-201ENST00000580269 81 ntBASIC0.37□□□□□ -2.35
LRRC42Q9Y546 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.166-201ENST00000363730 102 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 SNORD14E-201ENST00000364009 85 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 RNU4-40P-201ENST00000364351 143 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 RNY1P8-201ENST00000383970 114 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 RNU6-1323P-201ENST00000384025 107 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 RNU6-855P-201ENST00000410395 104 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 MCFD2P1-201ENST00000417812 300 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 PDCL2P1-201ENST00000419302 352 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 SNRPGP14-201ENST00000435400 219 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 MTND1P34-201ENST00000438556 671 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 PRDX4P1-201ENST00000507189 574 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.714-201ENST00000517065 90 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 AC144568.1-201ENST00000520139 137 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 AC138305.3-201ENST00000624988 240 ntBASIC0.36□□□□□ -2.35
LRRC42Q9Y546 RNU6-845P-201ENST00000362578 103 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.279-201ENST00000364763 95 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.310-201ENST00000365063 113 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RNU6-708P-201ENST00000384217 107 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 AC005534.2-201ENST00000431047 433 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.35□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.655-201ENST00000515919 96 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RN7SKP295-201ENST00000517264 153 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 AL355375.2-201ENST00000574825 175 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 MIR4714-201ENST00000580728 77 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 AL355073.2-201ENST00000612106 557 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 MIR6788-201ENST00000618842 66 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 U2.1-201ENST00000618978 145 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 U6.92-201ENST00000636464 89 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 TPTEP1-208ENST00000636884 213 ntBASIC0.35□□□□□ -2.35
LRRC42Q9Y546 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
LRRC42Q9Y546 RNU6-369P-201ENST00000362515 102 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.168-201ENST00000363740 102 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.203-201ENST00000364106 102 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.370-201ENST00000365589 108 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 SNORD38C-201ENST00000384381 69 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.570-201ENST00000384750 101 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 MIR570-201ENST00000384917 97 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 AL590004.1-201ENST00000405321 300 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 RNU6-710P-201ENST00000410424 105 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.34□□□□□ -2.36
LRRC42Q9Y546 NDUFA4P2-201ENST00000489989 244 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 RNU6-470P-201ENST00000515954 104 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 MIR5000-201ENST00000577717 103 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 AC087685.1-201ENST00000587507 141 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 AC012433.1-201ENST00000588916 398 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 AC022306.2-201ENST00000617563 647 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
LRRC42Q9Y546 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
LRRC42Q9Y546 RNU6-1175P-201ENST00000365200 107 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.341-201ENST00000365341 102 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.605-201ENST00000410577 105 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 FGF7P6-202ENST00000451282 293 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 MTCO3P10-201ENST00000455912 772 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 RPS29P1-201ENST00000465274 159 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.33□□□□□ -2.36
LRRC42Q9Y546 RNU6-830P-201ENST00000516353 107 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 RNU6-911P-201ENST00000516523 104 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 RNU7-116P-201ENST00000516940 62 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 AC024405.2-202ENST00000532731 184 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 MIR4423-201ENST00000580922 80 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 POLR3GP1-201ENST00000594073 261 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 AC104695.3-201ENST00000604052 296 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 AP003357.1-201ENST00000604497 148 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 AC007742.2-201ENST00000618226 398 ntBASIC0.33□□□□□ -2.36
LRRC42Q9Y546 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
LRRC42Q9Y546 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
LRRC42Q9Y546 MIR1-1-201ENST00000362147 71 ntBASIC0.32□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.27-201ENST00000362540 103 ntBASIC0.32□□□□□ -2.36
LRRC42Q9Y546 Y_RNA.160-201ENST00000363677 92 ntBASIC0.32□□□□□ -2.36
LRRC42Q9Y546 RNU6-442P-201ENST00000383968 104 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms