Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-199P-201ENST00000362954 107 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-290P-201ENST00000365212 101 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-163P-201ENST00000384396 106 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 ELOCP20-201ENST00000422460 345 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 AL135790.2-201ENST00000437701 267 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 LINC01399-202ENST00000458450 244 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 RPL23AP54-201ENST00000495129 419 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-902P-201ENST00000517212 91 ntBASIC1.56□□□□□ -2.16
KDM3AQ9Y4C1 SNORA25.1-201ENST00000362326 128 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-713P-201ENST00000384761 107 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AC113618.1-201ENST00000416747 285 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 MLLT10P1-201ENST00000418346 262 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AL731563.1-201ENST00000442202 214 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 HSPE1P25-201ENST00000455484 251 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 CYCTP-201ENST00000504253 315 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-322P-201ENST00000516010 103 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AC136628.3-201ENST00000521868 290 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AP003733.2-201ENST00000529409 171 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AL365434.2-201ENST00000607979 234 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.812-201ENST00000610788 101 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.784-201ENST00000613803 101 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.787-201ENST00000616522 101 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.780-201ENST00000617336 101 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 MIR548AY-201ENST00000617669 107 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.801-201ENST00000619005 101 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AC022140.2-201ENST00000623500 188 ntBASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.55□□□□□ -2.16
KDM3AQ9Y4C1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-102P-201ENST00000384485 104 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 MIR489-201ENST00000384923 84 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 MIR891A-201ENST00000401237 79 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AC117454.1-201ENST00000491120 168 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 HMGN1P7-201ENST00000491722 313 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 RNU2-31P-201ENST00000516954 155 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-1137P-201ENST00000517073 99 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AC024405.2-202ENST00000532731 184 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AC120024.3-201ENST00000603167 156 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AP003357.1-201ENST00000604497 148 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 JPX_2.1-201ENST00000614161 69 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AL591926.4-201ENST00000616895 298 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.153-201ENST00000363615 91 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 MIR518E-201ENST00000385252 88 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 AC010655.3-201ENST00000478818 450 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 RPL30P7-201ENST00000479312 323 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 RNU7-115P-201ENST00000516433 55 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-131P-201ENST00000391144 107 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-121P-201ENST00000410525 99 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 RPL39P38-201ENST00000467018 153 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-191P-201ENST00000516295 94 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 MIR2681-201ENST00000581814 105 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 AC007742.2-201ENST00000618226 398 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 U6.104-201ENST00000637979 90 ntBASIC1.52□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-833P-201ENST00000363486 107 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 U8.7-201ENST00000364940 136 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.326-201ENST00000365176 113 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-326P-201ENST00000365480 107 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AL451046.2-201ENST00000403074 277 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 MIR1276-201ENST00000408707 83 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 SNRPGP10-201ENST00000432323 225 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AC104332.1-201ENST00000440471 797 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AC127455.1-201ENST00000565496 145 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AL513534.2-201ENST00000603836 250 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 AL078604.3-201ENST00000615580 211 ntBASIC1.51□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-899P-201ENST00000363947 107 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-694P-201ENST00000364071 147 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 U8.5-201ENST00000364528 136 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 SNORA72.4-201ENST00000384174 132 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-1160P-201ENST00000384546 104 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RPL21P38-201ENST00000418090 167 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 PIGPP3-201ENST00000425307 415 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 MTCO1P5-201ENST00000433573 344 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms