Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC069439.1-201ENST00000494739 167 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 RNU6-120P-201ENST00000516077 103 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 RNU6-966P-201ENST00000516479 104 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 RNU6-1012P-201ENST00000516606 109 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 RNU11-2P-201ENST00000516898 142 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AL669831.3-213ENST00000636676 183 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AC010487.4-201ENST00000637027 61 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AL589743.1-201ENST00000551932 2712 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 SNORD113.3-201ENST00000364630 78 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
NUP50Q9UKX7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 SNORA69.1-201ENST00000390904 137 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 RNU6-131P-201ENST00000391144 107 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 HMGN2P32-201ENST00000444648 269 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 RPL30P15-201ENST00000457129 321 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
NUP50Q9UKX7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.45□□□□□ -2.34
NUP50Q9UKX7 RNU6-496P-201ENST00000516145 99 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 AC093027.1-201ENST00000546698 429 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 MIR6516-201ENST00000630554 81 ntBASIC0.45□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.72-201ENST00000362894 103 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNU6-324P-201ENST00000363957 106 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.577-201ENST00000384794 101 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNA5SP95-201ENST00000410319 137 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNU4-14P-201ENST00000410858 122 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 SNRPGP10-201ENST00000432323 225 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 FCF1P4-201ENST00000448326 183 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNU6-436P-201ENST00000516171 114 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 AC005176.2-201ENST00000596933 147 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 AC005972.2-201ENST00000604690 348 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 AC008133.2-201ENST00000624540 351 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.44□□□□□ -2.34
NUP50Q9UKX7 MIR4251-201ENST00000635819 61 ntBASIC0.44□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.148-201ENST00000363557 117 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.368-201ENST00000365547 113 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.446-201ENST00000384178 104 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 SNORA72-201ENST00000384339 132 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNY3P4-201ENST00000384428 101 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 MIR625-201ENST00000385047 85 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 SNORD105-201ENST00000386910 85 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 MIR1827-201ENST00000408549 66 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNU6-1156P-201ENST00000410365 100 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 AC005534.2-201ENST00000431047 433 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNU6-155P-201ENST00000516347 100 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 MIR4300-201ENST00000581016 96 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 MIR548AR-201ENST00000582191 57 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
NUP50Q9UKX7 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 RNU6-20P-201ENST00000384106 107 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 SNORA2B-201ENST00000384583 137 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 SNORD28B-201ENST00000390993 75 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP50Q9UKX7 RNU6-358P-201ENST00000516564 75 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 RNU7-30P-201ENST00000516835 62 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 AC012433.1-201ENST00000588916 398 ntBASIC0.42□□□□□ -2.34
NUP50Q9UKX7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
NUP50Q9UKX7 RNU6-626P-201ENST00000363354 107 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 RNA5SP325-201ENST00000363756 130 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 SNORA75.6-201ENST00000391318 127 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 MTCO2P27-201ENST00000420740 428 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 U8.19-201ENST00000459095 133 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 MTND4P17-201ENST00000470444 350 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 RBM11P1-201ENST00000604951 799 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 AC084782.3-201ENST00000612282 578 ntBASIC0.41□□□□□ -2.34
NUP50Q9UKX7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.35
NUP50Q9UKX7 MIR1-1-201ENST00000362147 71 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.6-201ENST00000362350 114 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 SNORD78.2-201ENST00000391076 69 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 RNU6-613P-201ENST00000410412 108 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.646-201ENST00000410980 101 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP50Q9UKX7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP50Q9UKX7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.691-201ENST00000516611 103 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 Z83818.1-201ENST00000603584 150 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 AC011476.5-201ENST00000615594 130 ntBASIC0.4□□□□□ -2.35
NUP50Q9UKX7 SNORD14E-201ENST00000364009 85 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 RNY3P11-201ENST00000364153 102 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 RNU6-310P-201ENST00000384655 107 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 MIR570-201ENST00000384917 97 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 RNU6-192P-201ENST00000391253 100 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms