Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC100767.1-201ENST00000528178 123 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 AL365265.1-201ENST00000621045 234 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.73□□□□□ -2.13
SIX4Q9UIU6 RNU7-116P-201ENST00000516940 62 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 AC011604.1-201ENST00000545978 196 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 AL929325.1-201ENST00000603096 117 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 AC100821.1-201ENST00000523153 2479 ntBASIC1.73□□□□□ -2.13
SIX4Q9UIU6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 MIR411-201ENST00000362239 96 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNU6-653P-201ENST00000363074 106 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNU6-200P-201ENST00000364743 107 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNU6-383P-201ENST00000410864 94 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC233266.1-201ENST00000454518 96 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNU6-341P-201ENST00000516973 96 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC242852.1-201ENST00000612151 96 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AL773524.1-201ENST00000614065 229 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 AC244015.1-201ENST00000622301 99 ntBASIC1.72□□□□□ -2.13
SIX4Q9UIU6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.83-201ENST00000363005 113 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 SNORA63D-201ENST00000364359 132 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNU6-923P-201ENST00000364753 107 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.297-201ENST00000364950 91 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 SNORA4.2-201ENST00000365313 147 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNU6-493P-201ENST00000391321 108 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 MIR1278-201ENST00000408753 81 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 HSPE1P9-201ENST00000440046 311 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 RNU6-437P-201ENST00000459408 95 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 COX6CP14-201ENST00000469580 174 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.71□□□□□ -2.14
SIX4Q9UIU6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
SIX4Q9UIU6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
SIX4Q9UIU6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
SIX4Q9UIU6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.308-201ENST00000365043 101 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 RNU6-482P-201ENST00000391068 107 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 RNU7-94P-201ENST00000459576 63 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 SNORA31.10-201ENST00000516482 106 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
SIX4Q9UIU6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SIX4Q9UIU6 RNA5SP432-201ENST00000362480 116 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 MIR520A-201ENST00000384862 85 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 RNU6-907P-201ENST00000390924 102 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
SIX4Q9UIU6 MIR4308-201ENST00000580634 81 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 MIR3668-201ENST00000582138 75 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.69□□□□□ -2.14
SIX4Q9UIU6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.69□□□□□ -2.14
SIX4Q9UIU6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SIX4Q9UIU6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SIX4Q9UIU6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX4Q9UIU6 MIR367-201ENST00000362299 68 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-674P-201ENST00000363831 107 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU4-17P-201ENST00000365598 141 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-47P-201ENST00000383866 107 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-969P-201ENST00000383900 105 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-144P-201ENST00000383951 107 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 SNORA8.3-201ENST00000384679 139 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 SNORA12.1-201ENST00000390873 148 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU11-5P-201ENST00000391216 129 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AC069257.2-201ENST00000441819 155 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-237P-201ENST00000515985 71 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms