Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MIR513C-201ENST00000401352 84 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 MTCO1P31-201ENST00000506355 492 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AC115990.1-201ENST00000526957 301 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AC005592.1-201ENST00000566527 1640 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 SNORA63.5-201ENST00000363548 123 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 RNU4-24P-201ENST00000364565 139 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 RNY3P4-201ENST00000384428 101 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 RNU2-8P-201ENST00000410727 190 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 COX7BP2-201ENST00000437976 242 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 SNORD2-201ENST00000459163 69 ntBASIC-1.35□□□□□ -2.62
CHD7Q9P2D1 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 RNU6-154P-201ENST00000384306 106 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AL022154.1-201ENST00000604698 785 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AL133255.1-201ENST00000606374 441 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC145423.2-201ENST00000610631 239 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 DISC2.1-201ENST00000612827 205 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC093783.1-201ENST00000612976 329 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 SNORD115-23-201ENST00000364461 82 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 RNU6-987P-201ENST00000384759 104 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 SNORD28B-201ENST00000390993 75 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC013470.1-201ENST00000453438 462 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC068339.1-201ENST00000526965 141 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 MIR4748-201ENST00000578076 82 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 MIR548AR-201ENST00000582191 57 ntBASIC-1.35□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-740P-201ENST00000364734 105 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AL390729.2-201ENST00000416137 156 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC020550.1-201ENST00000447385 163 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-107P-201ENST00000516643 102 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-58P-201ENST00000517143 103 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC131281.1-201ENST00000522984 164 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU4-80P-201ENST00000363200 141 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU4-10P-201ENST00000364383 140 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-926P-201ENST00000384075 107 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC026410.2-201ENST00000460281 156 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC068587.5-201ENST00000528506 175 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC004217.3-201ENST00000551552 878 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 AC104073.3-201ENST00000610942 955 ntBASIC-1.36□□□□□ -2.63
CHD7Q9P2D1 MIR562-201ENST00000384894 95 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 AC018880.2-201ENST00000414265 201 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 ELOCP20-201ENST00000422460 345 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 MIR570-201ENST00000384917 97 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 MIR548H3-201ENST00000408771 118 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 AC007547.1-201ENST00000462177 490 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 AC104629.1-201ENST00000494226 508 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 RNU6-528P-201ENST00000516926 100 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 ZNF321P-202ENST00000550843 495 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 MIR5693-201ENST00000577722 73 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 SNORD98-201ENST00000636377 67 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 MIR376A2-201ENST00000636782 80 ntBASIC-1.37□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AC084290.1-201ENST00000434995 374 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 MIR4308-201ENST00000580634 81 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AC087683.1-201ENST00000591187 441 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU4-15P-201ENST00000362613 141 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 MIR181A1-201ENST00000385026 110 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU6-572P-201ENST00000516724 80 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 PART1_1.1-201ENST00000611761 217 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU6-137P-201ENST00000363680 108 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU6-865P-201ENST00000364772 107 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 SNORD115-10-201ENST00000365073 81 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU4-20P-201ENST00000365601 151 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU6-476P-201ENST00000384726 107 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 MIR548I3-201ENST00000408378 149 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AL365338.1-201ENST00000422282 858 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AL354696.1-201ENST00000614652 497 ntBASIC-1.38□□□□□ -2.63
CHD7Q9P2D1 AL445523.1-201ENST00000451184 1362 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 AL008987.1-201ENST00000415528 237 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 RPL22P17-201ENST00000438729 315 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 MIR4491-201ENST00000581087 68 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms