Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORA26.5-201ENST00000391215 123 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 MIR1302-6-201ENST00000408466 90 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 AC108667.1-201ENST00000428618 249 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 AC093850.1-201ENST00000454121 251 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 AC091959.1-201ENST00000495857 238 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 MIR337-201ENST00000362281 93 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 RNU6-662P-201ENST00000384253 104 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 RNU6-163P-201ENST00000384396 106 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 RNU6-763P-201ENST00000390865 106 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 AL117187.1-201ENST00000555482 181 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 AC127455.1-201ENST00000565496 145 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 U6.104-201ENST00000637979 90 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 AC099654.10-201ENST00000640395 161 ntBASIC1.61□□□□□ -2.15
HCN3Q9P1Z3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 RNA5SP190-201ENST00000365222 118 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 RNU1-78P-201ENST00000391248 165 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 MIR548F4-201ENST00000408515 105 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 SNORA36B-201ENST00000410438 131 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 PIGPP3-201ENST00000425307 415 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 U8.19-201ENST00000459095 133 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 HMGN1P7-201ENST00000491722 313 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 SERF1AP1-201ENST00000514575 187 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 AL365434.2-201ENST00000607979 234 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 MIR8062-201ENST00000621515 85 ntBASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HCN3Q9P1Z3 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 BTF3P11-201ENST00000426582 477 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 SNRPGP10-201ENST00000432323 225 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 JPX_2.1-201ENST00000614161 69 ntBASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.59□□□□□ -2.15
HCN3Q9P1Z3 AL391987.6-201ENST00000305671 199 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 RNU6-899P-201ENST00000363947 107 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 RNU6-131P-201ENST00000391144 107 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 SNX2P2-201ENST00000424553 323 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 AL118496.2-201ENST00000448300 230 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 SNORA27.4-201ENST00000516650 95 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 AC120024.3-201ENST00000603167 156 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 AP001485.1-201ENST00000604799 199 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HCN3Q9P1Z3 MIRLET7C-201ENST00000362160 84 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNU6-199P-201ENST00000362954 107 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 MIR499A-201ENST00000384903 122 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 MIR891A-201ENST00000401237 79 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 RNU6-437P-201ENST00000459408 95 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 CYCTP-201ENST00000504253 315 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 AC114811.1-201ENST00000507207 168 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 AP001282.2-201ENST00000616149 309 ntBASIC1.57□□□□□ -2.16
HCN3Q9P1Z3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 MIR522-201ENST00000385071 87 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 MT-TW-201ENST00000387382 68 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 MIR1278-201ENST00000408753 81 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 RNU6-321P-201ENST00000410912 106 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AL358176.2-201ENST00000425769 204 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AC005357.1-201ENST00000588399 301 ntBASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HCN3Q9P1Z3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 221.3 ms