Protein–RNA interactions for Protein: Q9NY43

BARHL2, BarH-like 2 homeobox protein, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARHL2Q9NY43 RNU7-172P-201ENST00000517125 64 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 RNU6-794P-201ENST00000517261 64 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.62□□□□□ -2.15
BARHL2Q9NY43 MIR4282-201ENST00000583613 67 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.771-201ENST00000598668 102 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 AC073413.2-201ENST00000604332 360 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 AC011921.3-201ENST00000605540 361 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 AL442067.1-201ENST00000613261 223 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.789-201ENST00000622480 102 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 AC006435.5-201ENST00000624486 112 ntBASIC1.62□□□□□ -2.15
BARHL2Q9NY43 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 SNORD114-7-201ENST00000362520 77 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 U8.7-201ENST00000364940 136 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNY4P28-201ENST00000365281 93 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.456-201ENST00000384232 111 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU6-376P-201ENST00000384731 106 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 MIR1298-201ENST00000408783 112 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 EBAG9P1-201ENST00000418955 543 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU7-141P-201ENST00000459304 62 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 AC117454.1-201ENST00000491120 168 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU6-138P-201ENST00000515952 107 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU6-1146P-201ENST00000516282 102 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 RNU7-128P-201ENST00000517247 62 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 MIR3668-201ENST00000582138 75 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
BARHL2Q9NY43 U6.108-201ENST00000637764 58 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
BARHL2Q9NY43 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.4-201ENST00000362333 112 ntBASIC1.6□□□□□ -2.15
BARHL2Q9NY43 RNY1-201ENST00000364228 113 ntBASIC1.6□□□□□ -2.15
BARHL2Q9NY43 RNU4-10P-201ENST00000364383 140 ntBASIC1.6□□□□□ -2.15
BARHL2Q9NY43 DNAJC19P9-201ENST00000555084 351 ntBASIC1.6□□□□□ -2.15
BARHL2Q9NY43 AL353149.1-201ENST00000610667 244 ntBASIC1.6□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.199-201ENST00000364014 102 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.200-201ENST00000364018 102 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.297-201ENST00000364950 91 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 RNA5SP323-201ENST00000391094 133 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.626-201ENST00000411288 95 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.59□□□□□ -2.15
BARHL2Q9NY43 MTND5P15-201ENST00000434246 349 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.59□□□□□ -2.15
BARHL2Q9NY43 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AC024405.2-202ENST00000532731 184 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AL359075.3-201ENST00000613288 217 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AL078604.3-201ENST00000615580 211 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AC013791.1-201ENST00000616619 62 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 AC073349.3-201ENST00000617616 186 ntBASIC1.59□□□□□ -2.15
BARHL2Q9NY43 Y_RNA.83-201ENST00000363005 113 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU6-200P-201ENST00000364743 107 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU6-923P-201ENST00000364753 107 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 Y_RNA.293-201ENST00000364908 93 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNA5SP100-201ENST00000410903 110 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNA5SP59-201ENST00000410922 110 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AL162725.1-201ENST00000435405 301 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RPS4XP11-201ENST00000446897 772 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AL163195.1-201ENST00000496941 348 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU6-1278P-201ENST00000516130 107 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU7-99P-201ENST00000516271 62 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNVU1-2-201ENST00000516326 135 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU7-115P-201ENST00000516433 55 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 RNU1-142P-201ENST00000516682 145 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 MIR5692C2-201ENST00000577959 77 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AC005972.2-201ENST00000604690 348 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 MIR548AY-201ENST00000617669 107 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AL365265.1-201ENST00000621045 234 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.58□□□□□ -2.16
BARHL2Q9NY43 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
BARHL2Q9NY43 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
BARHL2Q9NY43 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
BARHL2Q9NY43 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 MIR411-201ENST00000362239 96 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 RNU6-899P-201ENST00000363947 107 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 Y_RNA.238-201ENST00000364441 102 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 Y_RNA.304-201ENST00000365011 112 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 Y_RNA.308-201ENST00000365043 101 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 Y_RNA.572-201ENST00000384757 98 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 MT-TR-201ENST00000387439 65 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 RNU6-493P-201ENST00000391321 108 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 CST2P1-201ENST00000425770 87 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 AL606517.2-201ENST00000442855 241 ntBASIC1.57□□□□□ -2.16
BARHL2Q9NY43 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms