Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC127455.1-201ENST00000565496 145 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 POLR3GP1-201ENST00000594073 261 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 AL080274.1-201ENST00000605565 220 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 SNORD113-5-201ENST00000607261 78 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 JPX_2.1-201ENST00000614161 69 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.804-201ENST00000615262 101 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 AL157834.3-201ENST00000615543 103 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 AC104985.2-201ENST00000620598 500 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 AL008636.1-201ENST00000625038 1018 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 SNORD14.1-201ENST00000365609 90 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 RNU6-969P-201ENST00000383900 105 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 AC040926.1-201ENST00000530195 238 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 MIR4303-201ENST00000581299 66 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 MIR4795-201ENST00000584182 89 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 AL359821.1-201ENST00000605519 182 ntBASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.05□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.80-201ENST00000362996 102 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.579-201ENST00000390939 94 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 RNU7-115P-201ENST00000516433 55 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 PRELID3BP2-201ENST00000605362 201 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 AL096861.1-201ENST00000610899 123 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 AC006157.1-201ENST00000611750 366 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 MIR548AY-201ENST00000617669 107 ntBASIC1.04□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.58-201ENST00000362807 102 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.154-201ENST00000363624 102 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 SNORD14E-201ENST00000364009 85 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.203-201ENST00000364106 102 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 RNY3P1-201ENST00000365085 102 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.424-201ENST00000384063 103 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 POLR2KP2-201ENST00000438155 177 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 DEFB117-201ENST00000602356 141 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 AL442644.1-201ENST00000454390 3105 ntBASIC1.03□□□□□ -2.24
CHCHD3Q9NX63 SNORD81.1-201ENST00000363064 77 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.370-201ENST00000365589 108 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 SNORD38C-201ENST00000384381 69 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 MLLT10P1-201ENST00000418346 262 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 MTND4LP30-201ENST00000454092 297 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.639-201ENST00000458981 102 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 RNU7-21P-201ENST00000459430 62 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 TRMT112P2-201ENST00000512910 132 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 AC090142.3-201ENST00000519012 385 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 AC024405.2-202ENST00000532731 184 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 AC104695.3-201ENST00000604052 296 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 uc_338.22-201ENST00000622722 187 ntBASIC1.02□□□□□ -2.25
CHCHD3Q9NX63 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.638-201ENST00000459374 113 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 RPL23AP54-201ENST00000495129 419 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.721-201ENST00000517207 102 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 AC090971.5-201ENST00000621102 293 ntBASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CHCHD3Q9NX63 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNU6-674P-201ENST00000363831 107 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.383-201ENST00000383855 97 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNU6-442P-201ENST00000383968 104 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNU6-937P-201ENST00000384325 106 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 SNORA17.3-201ENST00000391159 129 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 MTND1P14-201ENST00000427400 950 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 AL117351.2-201ENST00000513571 157 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNU11-2P-201ENST00000516898 142 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 AC136628.3-201ENST00000521868 290 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 AC090574.1-201ENST00000623186 233 ntBASIC1□□□□□ -2.25
CHCHD3Q9NX63 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CHCHD3Q9NX63 RNA5SP264-201ENST00000363115 107 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.143-201ENST00000363520 106 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 SNORD50B-201ENST00000364995 70 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.363-201ENST00000365529 113 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 SNORD42.2-201ENST00000365570 69 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 MIR802-201ENST00000390235 94 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 AL590004.1-201ENST00000405321 300 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 MTATP6P23-201ENST00000440153 476 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 MIR4764-201ENST00000580680 88 ntBASIC0.99□□□□□ -2.25
CHCHD3Q9NX63 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.222-201ENST00000364264 102 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.445-201ENST00000384168 102 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 MIR516B2-201ENST00000385190 85 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 FABP5P4-201ENST00000437203 171 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 MTND4P19-201ENST00000446659 478 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 RNU6-437P-201ENST00000459408 95 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 RNU6-830P-201ENST00000516353 107 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 AP003716.2-201ENST00000528260 108 ntBASIC0.98□□□□□ -2.25
CHCHD3Q9NX63 MIR3192-201ENST00000584920 77 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms