Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MIR4764-201ENST00000580680 88 ntBASIC0.88□□□□□ -2.27
ZCCHC3Q9NUD5 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
ZCCHC3Q9NUD5 AL442644.1-201ENST00000454390 3105 ntBASIC0.88□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.203-201ENST00000364106 102 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 RNU7-43P-201ENST00000516554 64 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.702-201ENST00000516843 96 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 SNORA18.7-201ENST00000516910 131 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 AC024405.2-202ENST00000532731 184 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 MIR548S-201ENST00000581352 82 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 AC112487.2-201ENST00000637950 304 ntBASIC0.87□□□□□ -2.27
ZCCHC3Q9NUD5 MIR103A2-201ENST00000362154 78 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.58-201ENST00000362807 102 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.154-201ENST00000363624 102 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 U8.7-201ENST00000364940 136 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 RNY3P1-201ENST00000365085 102 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.315-201ENST00000365117 102 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 RNY3-201ENST00000365484 102 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.439-201ENST00000384119 94 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.526-201ENST00000384572 110 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 MIR1185-1-201ENST00000408598 86 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 MTND1P14-201ENST00000427400 950 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 U8.20-201ENST00000459445 131 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 HMGN1P10-201ENST00000474557 553 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 RNU7-115P-201ENST00000516433 55 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.713-201ENST00000517013 96 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 AC127455.1-201ENST00000565496 145 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 MIR4801-201ENST00000582704 82 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 AC007742.2-201ENST00000618226 398 ntBASIC0.86□□□□□ -2.27
ZCCHC3Q9NUD5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.80-201ENST00000362996 102 ntBASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 RNA5SP48-201ENST00000363969 126 ntBASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 Y_RNA.485-201ENST00000384395 102 ntBASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 AC087685.1-201ENST00000587507 141 ntBASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 SEPT14P17-201ENST00000617978 177 ntBASIC0.85□□□□□ -2.27
ZCCHC3Q9NUD5 SNORD14E-201ENST00000364009 85 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RNU6-937P-201ENST00000384325 106 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RNY1P14-201ENST00000384426 108 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RNU4-30P-201ENST00000410245 143 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 AC117454.1-201ENST00000491120 168 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RPL23AP54-201ENST00000495129 419 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 AC108729.3-201ENST00000513484 108 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RNU6-237P-201ENST00000515985 71 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 MIR3145-201ENST00000580727 82 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 MIR4781-201ENST00000585250 76 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 MIR548AY-201ENST00000617669 107 ntBASIC0.84□□□□□ -2.27
ZCCHC3Q9NUD5 SNORA25.3-201ENST00000363205 127 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.143-201ENST00000363520 106 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.197-201ENST00000364004 102 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-21P-201ENST00000384710 107 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 AC010655.3-201ENST00000478818 450 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 AC005840.1-201ENST00000498412 377 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 MTND3P22-201ENST00000510932 243 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-475P-201ENST00000516073 104 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 JPX_2.1-201ENST00000614161 69 ntBASIC0.83□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.112-201ENST00000363250 102 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-1209P-201ENST00000363655 107 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.796-201ENST00000364268 102 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RNU4-50P-201ENST00000364361 141 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.799-201ENST00000364992 102 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RNY3P14-201ENST00000384309 102 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.471-201ENST00000384312 102 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 SNORD38C-201ENST00000384381 69 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.579-201ENST00000390939 94 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RPS3AP1-201ENST00000413190 320 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 AC040926.1-201ENST00000530195 238 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 AC006157.1-201ENST00000611750 366 ntBASIC0.82□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.383-201ENST00000383855 97 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-130P-201ENST00000411112 103 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 SNRPGP14-201ENST00000435400 219 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 AC136628.3-201ENST00000521868 290 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 PART1_1.1-201ENST00000611761 217 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.81□□□□□ -2.28
ZCCHC3Q9NUD5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms