Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
POLE3Q9NRF9 RNU6-613P-201ENST00000410412 108 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 RNU6-710P-201ENST00000410424 105 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.47□□□□□ -2.33
POLE3Q9NRF9 Y_RNA.635-201ENST00000459041 101 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 RPS29P1-201ENST00000465274 159 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 AC069439.1-201ENST00000494739 167 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 RNU6-470P-201ENST00000515954 104 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 MIR4659A-201ENST00000580269 81 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 AC104695.3-201ENST00000604052 296 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 JPX_2.1-201ENST00000614161 69 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 MIR6788-201ENST00000618842 66 ntBASIC0.47□□□□□ -2.33
POLE3Q9NRF9 Y_RNA.6-201ENST00000362350 114 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.146-201ENST00000363549 102 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.370-201ENST00000365589 108 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 MIR570-201ENST00000384917 97 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 MIR628-201ENST00000385229 95 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 RNU6-966P-201ENST00000516479 104 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 RNU6-358P-201ENST00000516564 75 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 POLR3GP1-201ENST00000594073 261 ntBASIC0.46□□□□□ -2.34
POLE3Q9NRF9 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNY3P11-201ENST00000364153 102 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNU6-396P-201ENST00000365369 105 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNU6-442P-201ENST00000383968 104 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 SNORD116-4-201ENST00000384733 96 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 SNORA75.6-201ENST00000391318 127 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNU4-14P-201ENST00000410858 122 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.646-201ENST00000410980 101 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 MCFD2P1-201ENST00000417812 300 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 MTND1P2-201ENST00000430604 821 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 MTND4P17-201ENST00000470444 350 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNU7-116P-201ENST00000516940 62 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 AL355375.2-201ENST00000574825 175 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.45□□□□□ -2.34
POLE3Q9NRF9 AC098679.4-201ENST00000624241 654 ntBASIC0.45□□□□□ -2.34
POLE3Q9NRF9 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.230-201ENST00000364348 109 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.341-201ENST00000365341 102 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 RNU6-1323P-201ENST00000384025 107 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 MIR548J-201ENST00000408833 112 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 RNU6-370P-201ENST00000411008 104 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 MTCO2P27-201ENST00000420740 428 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 MIR5690-201ENST00000583739 73 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 MIR151B-201ENST00000584249 96 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 AC022441.3-201ENST00000605737 136 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 Pinc.1-201ENST00000616452 154 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 AC073869.6-201ENST00000640656 341 ntBASIC0.44□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.203-201ENST00000364106 102 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 RNY1P8-201ENST00000383970 114 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 RNU6-310P-201ENST00000384655 107 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.43□□□□□ -2.34
POLE3Q9NRF9 RN7SKP295-201ENST00000517264 153 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.43□□□□□ -2.34
POLE3Q9NRF9 MIR5000-201ENST00000577717 103 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 AC087685.1-201ENST00000587507 141 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 RBM11P1-201ENST00000604951 799 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 AC084782.3-201ENST00000612282 578 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.43□□□□□ -2.34
POLE3Q9NRF9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 SNORA51.10-201ENST00000384418 136 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 MIR140-201ENST00000385282 100 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 U8.17-201ENST00000391292 132 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 MTND1P34-201ENST00000438556 671 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.42□□□□□ -2.34
POLE3Q9NRF9 RPL23AP54-201ENST00000495129 419 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.42□□□□□ -2.34
POLE3Q9NRF9 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 U2.1-201ENST00000618978 145 ntBASIC0.42□□□□□ -2.34
POLE3Q9NRF9 RNU6-1188P-201ENST00000363795 107 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 RNU6-1175P-201ENST00000365200 107 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 RNU6-890P-201ENST00000384121 107 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.41□□□□□ -2.34
POLE3Q9NRF9 AC005730.3-201ENST00000583067 366 ntBASIC0.41□□□□□ -2.34
POLE3Q9NRF9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
POLE3Q9NRF9 MIR499A-201ENST00000384903 122 ntBASIC0.4□□□□□ -2.35
POLE3Q9NRF9 MTCO2P12-201ENST00000427426 682 ntBASIC0.4□□□□□ -2.35
POLE3Q9NRF9 AC005042.3-201ENST00000453230 174 ntBASIC0.4□□□□□ -2.35
POLE3Q9NRF9 RNU6-830P-201ENST00000516353 107 ntBASIC0.4□□□□□ -2.35
POLE3Q9NRF9 AC024405.2-202ENST00000532731 184 ntBASIC0.4□□□□□ -2.35
POLE3Q9NRF9 RNU6-845P-201ENST00000362578 103 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 Y_RNA.310-201ENST00000365063 113 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 Y_RNA.456-201ENST00000384232 111 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
POLE3Q9NRF9 AC024067.1-201ENST00000426199 223 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms