Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 U8.6-201ENST00000364939 135 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 RNU6-606P-201ENST00000384721 111 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 RNY1P7-201ENST00000384743 110 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 MIR1-2-201ENST00000384961 85 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 SNORA75.4-201ENST00000391278 119 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 RNU4-83P-201ENST00000410863 133 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 RNU6-847P-201ENST00000411115 108 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 SSR1P2-201ENST00000415208 787 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 RNA5SP66-201ENST00000517178 101 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AC069431.2-201ENST00000604149 1099 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AC072046.2-201ENST00000618366 268 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AC009248.2-201ENST00000619826 254 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AL607023.1-201ENST00000620045 248 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AL162376.1-201ENST00000624117 175 ntBASIC-1.08□□□□□ -2.58
MRPL40Q9NQ50 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 RNU6-541P-201ENST00000384709 110 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 RNU6-830P-201ENST00000516353 107 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 U6.115-201ENST00000636045 103 ntBASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.09□□□□□ -2.58
MRPL40Q9NQ50 RNU4-32P-201ENST00000363404 141 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 SNORD38B-201ENST00000384690 67 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 RNU6-159P-201ENST00000391080 106 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 AL590002.1-201ENST00000406554 418 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 RPL30P16-201ENST00000419341 429 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 GPR143P-201ENST00000434155 205 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 AL138752.1-201ENST00000452964 351 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 RNU2-13P-201ENST00000515909 113 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 Vault.3-201ENST00000516676 95 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 AP003168.1-201ENST00000530091 307 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 AL157687.1-201ENST00000554853 619 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 AC105081.1-201ENST00000617727 106 ntBASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.1□□□□□ -2.59
MRPL40Q9NQ50 RNU6-324P-201ENST00000363957 106 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 SNORD14E-201ENST00000364009 85 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 SNORD115-32-201ENST00000364079 82 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 SNORA1-201ENST00000384107 130 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 SNORD93-201ENST00000408813 74 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 snoU13.2-201ENST00000459201 104 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 AC010205.1-201ENST00000616668 449 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 AC084368.1-201ENST00000620935 65 ntBASIC-1.11□□□□□ -2.59
MRPL40Q9NQ50 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 MT-TF-201ENST00000387314 71 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 RNU6-325P-201ENST00000411132 105 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 AC236972.2-201ENST00000434979 310 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 MIR5583-1-201ENST00000580941 59 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 AP001330.5-201ENST00000607176 411 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 MIR4320-201ENST00000636981 65 ntBASIC-1.12□□□□□ -2.59
MRPL40Q9NQ50 MIR30D-201ENST00000362283 70 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 SNORA1.2-201ENST00000365189 134 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 RNU6-108P-201ENST00000365558 107 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 SNORA22B-201ENST00000383876 138 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 RNU6-157P-201ENST00000383957 107 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC108059.2-201ENST00000434626 151 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 MTATP6P14-201ENST00000455189 673 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 RNU6-475P-201ENST00000516073 104 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC022878.1-201ENST00000530684 149 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC027807.2-201ENST00000616099 408 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 MIR6738-201ENST00000619620 64 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 AC023510.2-201ENST00000622162 746 ntBASIC-1.13□□□□□ -2.59
MRPL40Q9NQ50 ZNF299P-201ENST00000406845 1804 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 RNU4-68P-201ENST00000364314 141 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 SNORD83B-201ENST00000386745 93 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 AL137161.1-201ENST00000532231 390 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 MIR198-201ENST00000637333 62 ntBASIC-1.14□□□□□ -2.59
MRPL40Q9NQ50 RNU6-490P-201ENST00000362985 107 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 SNORD50.1-201ENST00000362987 71 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 RNU6-501P-201ENST00000364072 100 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 RNU6-47P-201ENST00000383866 107 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 CPDP1-201ENST00000579660 283 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 PIGPP4-201ENST00000584447 307 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 AP000811.1-201ENST00000603803 651 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 Z84480.1-201ENST00000605131 311 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 AC093726.3-201ENST00000637588 150 ntBASIC-1.15□□□□□ -2.59
MRPL40Q9NQ50 RNU6-726P-201ENST00000364680 107 ntBASIC-1.16□□□□□ -2.6
MRPL40Q9NQ50 RNY3-201ENST00000365484 102 ntBASIC-1.16□□□□□ -2.6
MRPL40Q9NQ50 RNU6-291P-201ENST00000384720 107 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms