Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU6-440P-201ENST00000390882 105 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU6-907P-201ENST00000390924 102 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU6-360P-201ENST00000390944 104 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU6-381P-201ENST00000391259 108 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 RN7SKP101-201ENST00000411376 320 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 AC009310.1-201ENST00000414414 451 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 AL603825.1-201ENST00000438481 80 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU7-120P-201ENST00000459334 63 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 AL929325.1-201ENST00000603096 117 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 AC098479.1-201ENST00000609225 154 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 Y_RNA.783-201ENST00000613546 102 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VTA1Q9NP79 SNORA1B-201ENST00000362535 133 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 RNA5SP109-201ENST00000391010 116 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 Z98949.2-201ENST00000440996 144 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 MIR6845-201ENST00000613182 61 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VTA1Q9NP79 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
VTA1Q9NP79 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VTA1Q9NP79 Y_RNA.24-201ENST00000362508 103 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 Y_RNA.265-201ENST00000364677 108 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 MIR583-201ENST00000384846 75 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 RNU6-918P-201ENST00000391219 106 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 RNU2-55P-201ENST00000411146 174 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 COX6CP10-201ENST00000416832 224 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 AP002392.1-201ENST00000537692 208 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 MIR4762-201ENST00000585261 75 ntBASIC2.28□□□□□ -2.04
VTA1Q9NP79 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
VTA1Q9NP79 U8.5-201ENST00000364528 136 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 RNU4-70P-201ENST00000384579 139 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.27□□□□□ -2.05
VTA1Q9NP79 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.27□□□□□ -2.05
VTA1Q9NP79 AL021707.8-201ENST00000609428 183 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 AC004792.1-201ENST00000614523 137 ntBASIC2.27□□□□□ -2.05
VTA1Q9NP79 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VTA1Q9NP79 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VTA1Q9NP79 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 RNU6-1209P-201ENST00000363655 107 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 Y_RNA.796-201ENST00000364268 102 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 Y_RNA.238-201ENST00000364441 102 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 Y_RNA.253-201ENST00000364562 112 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 Y_RNA.799-201ENST00000364992 102 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 RNU6-1080P-201ENST00000383982 107 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 Y_RNA.571-201ENST00000384753 98 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 MTND5P15-201ENST00000434246 349 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 snoU13.27-201ENST00000459278 104 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 MIR4662B-201ENST00000579498 81 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
VTA1Q9NP79 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.26□□□□□ -2.05
VTA1Q9NP79 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VTA1Q9NP79 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
VTA1Q9NP79 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VTA1Q9NP79 Y_RNA.229-201ENST00000364347 113 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 RNU6-923P-201ENST00000364753 107 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 RNU6-493P-201ENST00000391321 108 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.25□□□□□ -2.05
VTA1Q9NP79 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 SNRPGP10-201ENST00000432323 225 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 AL606517.2-201ENST00000442855 241 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.25□□□□□ -2.05
VTA1Q9NP79 MIR4709-201ENST00000577272 72 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 MIR4308-201ENST00000580634 81 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 MIR4744-201ENST00000581563 82 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VTA1Q9NP79 AC068700.1-201ENST00000565862 3754 ntBASIC2.25□□□□□ -2.05
VTA1Q9NP79 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
VTA1Q9NP79 MIR126-201ENST00000362291 85 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 Y_RNA.233-201ENST00000364407 101 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RNU4-52P-201ENST00000384209 138 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RNU6-131P-201ENST00000391144 107 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 MIR1278-201ENST00000408753 81 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RNU6-383P-201ENST00000410864 94 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RNA5SP437-201ENST00000517249 129 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 RPL23AP91-201ENST00000569211 455 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 uc_338.4-201ENST00000616635 176 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 U6.106-201ENST00000636360 105 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 AP000553.5-201ENST00000641933 54 ntBASIC2.24□□□□□ -2.05
VTA1Q9NP79 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VTA1Q9NP79 Y_RNA.75-201ENST00000362927 97 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 RNU6-312P-201ENST00000364629 107 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 CYCSP49-201ENST00000420810 319 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 HSPE1P9-201ENST00000440046 311 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 SNORD11-201ENST00000459124 84 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms