Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.65□□□□□ -2.31
HMG20AQ9NP66 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 MIR5188-201ENST00000583467 113 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 MIR4781-201ENST00000585250 76 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 SNORD58B-201ENST00000607313 66 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 AC112487.2-201ENST00000637950 304 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 RNA5SP264-201ENST00000363115 107 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.187-201ENST00000363918 113 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.331-201ENST00000365267 102 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.341-201ENST00000365341 102 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 RNU6-1335P-201ENST00000365426 107 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.356-201ENST00000365475 113 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 AC117470.1-201ENST00000381974 330 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 MIR1185-1-201ENST00000408598 86 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 RNU7-152P-201ENST00000458982 64 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 SNORA74.3-201ENST00000517108 154 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 AP003716.2-201ENST00000528260 108 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 MIR6767-201ENST00000637302 66 ntBASIC0.64□□□□□ -2.31
HMG20AQ9NP66 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 RNU6-1048P-201ENST00000364054 107 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 U8.7-201ENST00000364940 136 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 RNU6-937P-201ENST00000384325 106 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 MIR136-201ENST00000385207 82 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 MIR1278-201ENST00000408753 81 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 AC005042.3-201ENST00000453230 174 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 AC117454.1-201ENST00000491120 168 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 RNU6-197P-201ENST00000516680 100 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 MIR4764-201ENST00000580680 88 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 POLR3GP1-201ENST00000594073 261 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HMG20AQ9NP66 RBM11P1-201ENST00000604951 799 ntBASIC0.63□□□□□ -2.31
HMG20AQ9NP66 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HMG20AQ9NP66 MIR103A2-201ENST00000362154 78 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.143-201ENST00000363520 106 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 snoU2-30.1-201ENST00000365012 70 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.315-201ENST00000365117 102 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.368-201ENST00000365547 113 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 SNORD28B-201ENST00000390993 75 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 RNU6-131P-201ENST00000391144 107 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.62□□□□□ -2.31
HMG20AQ9NP66 RNU7-90P-201ENST00000459216 62 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 SNORD123-201ENST00000459473 70 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 FGF7P4-201ENST00000509595 295 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 RNU7-110P-201ENST00000516891 62 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AC022616.4-201ENST00000522985 181 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AC024405.2-202ENST00000532731 184 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HMG20AQ9NP66 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 AC010205.1-201ENST00000616668 449 ntBASIC0.62□□□□□ -2.31
HMG20AQ9NP66 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.148-201ENST00000363557 117 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.286-201ENST00000364813 102 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 SNORD14.1-201ENST00000365609 90 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RNU6-1323P-201ENST00000384025 107 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RNU2-14P-201ENST00000411053 191 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RNU6-130P-201ENST00000411112 103 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 AL160004.2-201ENST00000432935 350 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
HMG20AQ9NP66 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RN7SKP164-201ENST00000516138 266 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 RNA5SP102-201ENST00000516865 106 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.61□□□□□ -2.31
HMG20AQ9NP66 AC131055.1-201ENST00000584626 316 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 PART1_1.1-201ENST00000611761 217 ntBASIC0.61□□□□□ -2.31
HMG20AQ9NP66 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.39-201ENST00000362620 98 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.70-201ENST00000362886 110 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 RNU6-1209P-201ENST00000363655 107 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.203-201ENST00000364106 102 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 RNY1P14-201ENST00000384426 108 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 MIR200A-201ENST00000384875 90 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.579-201ENST00000390939 94 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 MIR1302-7-201ENST00000408841 72 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 NDUFA4P2-201ENST00000489989 244 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 RPL23AP54-201ENST00000495129 419 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 RNA5SP255-201ENST00000516370 107 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 MIR548AR-201ENST00000582191 57 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.772-201ENST00000606692 102 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 AC011373.1-201ENST00000607270 237 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 AC007485.1-201ENST00000616755 206 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 AL606534.2-204ENST00000635008 178 ntBASIC0.6□□□□□ -2.31
HMG20AQ9NP66 AC134026.1-201ENST00000623249 2239 ntBASIC0.59□□□□□ -2.31
HMG20AQ9NP66 RNU6-654P-201ENST00000364373 107 ntBASIC0.59□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.252-201ENST00000364556 101 ntBASIC0.59□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.263-201ENST00000364659 114 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms