Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RNU6-321P-201ENST00000410912 106 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AC016907.1-201ENST00000419483 435 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AC244023.1-201ENST00000426884 112 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-229P-201ENST00000516614 102 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 MIR4498-201ENST00000577599 66 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 MIR5188-201ENST00000583467 113 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AC242498.1-201ENST00000604134 111 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 RMST_2.1-201ENST00000617263 136 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 AC243994.1-201ENST00000618627 109 ntBASIC0.25□□□□□ -2.37
SND1-IT1Q9HBX3 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 RNA5SP347-201ENST00000362445 119 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-580P-201ENST00000365159 107 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 SNORA1.2-201ENST00000365189 134 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 RNA5SP95-201ENST00000410319 137 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 SNRPGP14-201ENST00000435400 219 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 AC092628.1-201ENST00000436250 252 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 AC005042.3-201ENST00000453230 174 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 RNU4-57P-201ENST00000515980 135 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 MIR4714-201ENST00000580728 77 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 AP003357.1-201ENST00000604497 148 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 MIR6715A-201ENST00000615929 79 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 AC015726.2-201ENST00000620112 122 ntBASIC0.24□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.6-201ENST00000362350 114 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-369P-201ENST00000362515 102 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 RNY1P10-201ENST00000363268 113 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 RNY1P8-201ENST00000383970 114 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 MIR628-201ENST00000385229 95 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 MIR548F1-201ENST00000408667 84 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 AC024067.1-201ENST00000426199 223 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 MTND1P34-201ENST00000438556 671 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-358P-201ENST00000516564 75 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 AC127455.1-201ENST00000565496 145 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 MIR4659A-201ENST00000580269 81 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 MIR4264-201ENST00000583520 66 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 POLR3GP1-201ENST00000594073 261 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 AP000753.3-201ENST00000604083 169 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 AC098679.4-201ENST00000624241 654 ntBASIC0.23□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 SNORD116-4-201ENST00000384733 96 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 MIR216A-201ENST00000385063 110 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 U8.17-201ENST00000391292 132 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-718P-201ENST00000516166 105 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNU7-30P-201ENST00000516835 62 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-1213P-201ENST00000517075 94 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 MIR4423-201ENST00000580922 80 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 MIR2681-201ENST00000581814 105 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 AC008507.4-201ENST00000585464 127 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 U2.1-201ENST00000618978 145 ntBASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
SND1-IT1Q9HBX3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-268P-201ENST00000364174 107 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-767P-201ENST00000384132 107 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 SNORA50A-201ENST00000384225 134 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MIR520H-201ENST00000385126 88 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MTCO2P33-201ENST00000402100 465 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 AC098934.3-201ENST00000430450 190 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-966P-201ENST00000516479 104 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 AC024405.2-202ENST00000532731 184 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MIR5690-201ENST00000583739 73 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MIR4769-201ENST00000584126 77 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 AC012433.1-201ENST00000588916 398 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MIR4791-201ENST00000607666 84 ntBASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
SND1-IT1Q9HBX3 MIR18A-201ENST00000362310 71 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 RNU6-310P-201ENST00000384655 107 ntBASIC0.2□□□□□ -2.38
SND1-IT1Q9HBX3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms