Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL391987.6-201ENST00000305671 199 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 Y_RNA.376-201ENST00000365638 108 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 MIR802-201ENST00000390235 94 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 BTF3P11-201ENST00000426582 477 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-437P-201ENST00000459408 95 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-322P-201ENST00000516010 103 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-1045P-201ENST00000516321 107 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 MIR8062-201ENST00000621515 85 ntBASIC1.53□□□□□ -2.16
BRF2Q9HAW0 U8.5-201ENST00000364528 136 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AC114811.1-201ENST00000507207 168 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 SNORA27.4-201ENST00000516650 95 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AL161670.1-201ENST00000554348 137 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AC005357.1-201ENST00000588399 301 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AL513534.2-201ENST00000603836 250 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AL353621.2-201ENST00000605340 133 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AL078604.3-201ENST00000615580 211 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
BRF2Q9HAW0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
BRF2Q9HAW0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.47-201ENST00000362697 108 ntBASIC1.51□□□□□ -2.17
BRF2Q9HAW0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.51□□□□□ -2.17
BRF2Q9HAW0 MIR522-201ENST00000385071 87 ntBASIC1.51□□□□□ -2.17
BRF2Q9HAW0 MIR548F4-201ENST00000408515 105 ntBASIC1.51□□□□□ -2.17
BRF2Q9HAW0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
BRF2Q9HAW0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
BRF2Q9HAW0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
BRF2Q9HAW0 MIRLET7C-201ENST00000362160 84 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 MIR504-201ENST00000385065 83 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 MIR1302-3-201ENST00000408128 138 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
BRF2Q9HAW0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 RNU6-144P-201ENST00000383951 107 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
BRF2Q9HAW0 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 RNU6-922P-201ENST00000516753 99 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 AL512310.8-201ENST00000550183 120 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 MIR4762-201ENST00000585261 75 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 AC013791.1-201ENST00000616619 62 ntBASIC1.49□□□□□ -2.17
BRF2Q9HAW0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
BRF2Q9HAW0 MIR367-201ENST00000362299 68 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 SNORD14E-201ENST00000364009 85 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.483-201ENST00000384380 101 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 MIR452-201ENST00000385020 85 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AL451046.2-201ENST00000403074 277 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.48□□□□□ -2.17
BRF2Q9HAW0 HMGN2P32-201ENST00000444648 269 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AL118496.2-201ENST00000448300 230 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RN7SL429P-201ENST00000479090 223 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RN7SL489P-201ENST00000486185 223 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RN7SL327P-201ENST00000488659 223 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 SNORD45.4-201ENST00000516629 73 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RPL23AP91-201ENST00000569211 455 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.48□□□□□ -2.17
BRF2Q9HAW0 MIR5692C2-201ENST00000577959 77 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AL357312.1-201ENST00000603879 298 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AP001282.2-201ENST00000616149 309 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RN7SL853P-201ENST00000617250 223 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 AC099654.10-201ENST00000640395 161 ntBASIC1.48□□□□□ -2.17
BRF2Q9HAW0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 MIR653-201ENST00000385279 96 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 MIR1278-201ENST00000408753 81 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 AL358176.2-201ENST00000425769 204 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.47□□□□□ -2.17
BRF2Q9HAW0 MIR3664-201ENST00000579074 99 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 snoU18.1-201ENST00000629629 71 ntBASIC1.47□□□□□ -2.17
BRF2Q9HAW0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.47□□□□□ -2.17
BRF2Q9HAW0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
BRF2Q9HAW0 RNU6-674P-201ENST00000363831 107 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 MT-TW-201ENST00000387382 68 ntBASIC1.46□□□□□ -2.18
BRF2Q9HAW0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 385.4 ms