Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.383-201ENST00000383855 97 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 RNU6-710P-201ENST00000410424 105 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 HMGN1P10-201ENST00000474557 553 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 MIR4452-201ENST00000583004 71 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 MIR3171-201ENST00000584270 74 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPF1Q9H9Y2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 SNORD113-8-201ENST00000363497 74 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 SNORA63.7-201ENST00000365579 123 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.389-201ENST00000383924 113 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 SNORA72-201ENST00000384339 132 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 MIR518E-201ENST00000385252 88 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 MIR1252-201ENST00000408861 65 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 RNU6-121P-201ENST00000410525 99 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 AC114811.1-201ENST00000507207 168 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 AC090049.2-201ENST00000550377 109 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 SNORD113-5-201ENST00000607261 78 ntBASIC1.2□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 RNU6-833P-201ENST00000363486 107 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.183-201ENST00000363882 113 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 U8.5-201ENST00000364528 136 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 U8.7-201ENST00000364940 136 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 RNU6-1323P-201ENST00000384025 107 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.418-201ENST00000384029 102 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.456-201ENST00000384232 111 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 RNU6-163P-201ENST00000384396 106 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 MIR522-201ENST00000385071 87 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 SNORD115-46-201ENST00000390982 71 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 RNU6-101P-201ENST00000410323 104 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 RNU2-14P-201ENST00000411053 191 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 HSPE1P25-201ENST00000455484 251 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 SEPT14P8-201ENST00000508026 178 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 AC136443.5-201ENST00000603741 370 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 MIR376A1-201ENST00000616574 68 ntBASIC1.19□□□□□ -2.22
RPF1Q9H9Y2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 RNU6-1048P-201ENST00000364054 107 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.222-201ENST00000364264 102 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.527-201ENST00000384573 102 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 MIR891A-201ENST00000401237 79 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.602-201ENST00000410535 92 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 POLR2KP2-201ENST00000438155 177 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 AC117454.1-201ENST00000491120 168 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 CYCTP-201ENST00000504253 315 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.701-201ENST00000516812 110 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 RNU6-1137P-201ENST00000517073 99 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 AC024405.2-202ENST00000532731 184 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 POLR3GP1-201ENST00000594073 261 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 AC027279.3-201ENST00000625055 122 ntBASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.18□□□□□ -2.22
RPF1Q9H9Y2 RNU6-801P-201ENST00000364087 105 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 SNORD114-22-201ENST00000365423 72 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 SNORA2.2-201ENST00000365473 135 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 RNU6-1105P-201ENST00000384774 107 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 MLLT10P1-201ENST00000418346 262 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 MTCYBP6-201ENST00000441810 138 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 AC098869.1-201ENST00000481627 292 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 RNU6-496P-201ENST00000516145 99 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 RNU7-115P-201ENST00000516433 55 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 AL078603.1-201ENST00000603824 313 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 AP003357.1-201ENST00000604497 148 ntBASIC1.17□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.26-201ENST00000362539 101 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.158-201ENST00000363651 101 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.214-201ENST00000364201 112 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 RNU6-806P-201ENST00000365147 105 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 ELOCP20-201ENST00000422460 345 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 Y_RNA.721-201ENST00000517207 102 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 AC113195.1-201ENST00000579952 141 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 MIR4680-201ENST00000580906 66 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 FAM106DP-201ENST00000586416 501 ntBASIC1.16□□□□□ -2.22
RPF1Q9H9Y2 SNORA26.5-201ENST00000391215 123 ntBASIC1.15□□□□□ -2.23
RPF1Q9H9Y2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.15□□□□□ -2.23
RPF1Q9H9Y2 AC024067.1-201ENST00000426199 223 ntBASIC1.15□□□□□ -2.23
RPF1Q9H9Y2 RNU6-191P-201ENST00000516295 94 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms