Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SNORD28B-201ENST00000390993 75 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 AC074085.1-201ENST00000413598 418 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 SNRPGP10-201ENST00000432323 225 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 MTND2P22-201ENST00000444325 1033 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 RNU6-408P-201ENST00000515910 100 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 RNU6-977P-201ENST00000516411 103 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 RNU4-77P-201ENST00000516692 156 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 AC109635.3-201ENST00000529536 185 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.11□□□□□ -2.39
ALX4Q9H161 MIR3612-201ENST00000579753 87 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 AC005972.2-201ENST00000604690 348 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 AC018462.2-201ENST00000605375 395 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 MIR377-201ENST00000362145 69 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 Y_RNA.178-201ENST00000363832 102 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
ALX4Q9H161 MT-TN-201ENST00000387400 73 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 RNU2-16P-201ENST00000410712 136 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 RNU2-61P-201ENST00000411069 191 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.1□□□□□ -2.39
ALX4Q9H161 Y_RNA.688-201ENST00000516565 95 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 MIR2355-201ENST00000517199 87 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 MTND3P12-201ENST00000559068 328 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 MIR4790-201ENST00000577799 79 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
ALX4Q9H161 Y_RNA.2-201ENST00000362330 96 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 RNU6-1301P-201ENST00000362724 104 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 RNU6-934P-201ENST00000365154 107 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 Y_RNA.433-201ENST00000384089 102 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
ALX4Q9H161 RNU2-54P-201ENST00000410299 190 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.09□□□□□ -2.4
ALX4Q9H161 AC026782.1-201ENST00000512952 449 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 RNU6-830P-201ENST00000516353 107 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.09□□□□□ -2.4
ALX4Q9H161 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.09□□□□□ -2.4
ALX4Q9H161 RBM11P1-201ENST00000604951 799 ntBASIC0.09□□□□□ -2.4
ALX4Q9H161 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 Y_RNA.172-201ENST00000363765 102 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 RNU6-1090P-201ENST00000364065 94 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 Y_RNA.301-201ENST00000364990 103 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 SNORA51.10-201ENST00000384418 136 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 SNORD83.1-201ENST00000411362 77 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 AL353997.1-201ENST00000432936 108 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 MTND3P21-201ENST00000433774 331 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 SNRPGP12-201ENST00000449481 213 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 CHEK2P4-201ENST00000450340 246 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 NDUFA4P2-201ENST00000489989 244 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 MTND5P5-201ENST00000503764 376 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 SNORA25.12-201ENST00000516202 82 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 RNU6-1016P-201ENST00000516689 94 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.08□□□□□ -2.4
ALX4Q9H161 Pinc.1-201ENST00000616452 154 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 AC067863.3-201ENST00000624172 122 ntBASIC0.08□□□□□ -2.4
ALX4Q9H161 RNU6-593P-201ENST00000364716 112 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 Y_RNA.402-201ENST00000383972 102 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 Y_RNA.537-201ENST00000384626 109 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 MIR570-201ENST00000384917 97 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 MIR518A1-201ENST00000385068 85 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 Y_RNA.594-201ENST00000410373 140 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 RNU6-1148P-201ENST00000410992 104 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 SNORA40.8-201ENST00000411034 126 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.07□□□□□ -2.4
ALX4Q9H161 RNU6-506P-201ENST00000516553 94 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 RNU6-314P-201ENST00000516574 104 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 RNU6-1012P-201ENST00000516606 109 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AC055872.1-201ENST00000570978 278 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AC087685.1-201ENST00000587507 141 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AC018638.8-201ENST00000588755 281 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AP000753.3-201ENST00000604083 169 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 AC240442.1-201ENST00000616055 283 ntBASIC0.07□□□□□ -2.4
ALX4Q9H161 Y_RNA.157-201ENST00000363638 102 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 SNORD45.3-201ENST00000363836 72 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 RNU6-961P-201ENST00000363893 105 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 Y_RNA.473-201ENST00000384333 102 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 U8.17-201ENST00000391292 132 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 RNA5SP118-201ENST00000410385 109 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 RNU6-1050P-201ENST00000410388 107 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 MTCO2P27-201ENST00000420740 428 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 snoU13.21-201ENST00000459368 105 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 MIR4771-2-201ENST00000577758 74 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 MIR548AO-201ENST00000579992 96 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 MIR4804-201ENST00000581683 73 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 MIR4771-1-201ENST00000582617 74 ntBASIC0.06□□□□□ -2.4
ALX4Q9H161 Y_RNA.51-201ENST00000362725 102 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 Y_RNA.101-201ENST00000363154 102 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNA5SP517-201ENST00000364724 117 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNU6-442P-201ENST00000383968 104 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNU6-679P-201ENST00000391003 106 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNU6-192P-201ENST00000391253 100 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 AC011352.1-201ENST00000512300 793 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.05□□□□□ -2.4
ALX4Q9H161 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms