Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SNORA12.1-201ENST00000390873 148 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 SNORA79-201ENST00000408376 140 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNA5SP100-201ENST00000410903 110 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNA5SP59-201ENST00000410922 110 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 HSPE1P9-201ENST00000440046 311 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNU7-34P-201ENST00000459394 64 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNA5SP437-201ENST00000517249 129 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 MIR4709-201ENST00000577272 72 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 AC108706.1-201ENST00000611053 297 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 MIR6766-201ENST00000622641 72 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 RNU6-275P-201ENST00000364910 107 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 SNORA4.2-201ENST00000365313 147 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 RNU6-886P-201ENST00000384319 105 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 RN7SKP51-201ENST00000410781 304 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 AL158823.1-201ENST00000418441 478 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 AC109810.1-201ENST00000534066 224 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 AC008555.8-201ENST00000623602 2168 ntBASIC2.5□□□□□ -2.01
CCDC113Q9H0I3 AC005336.3-201ENST00000623833 2679 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 ICE2P2-201ENST00000483823 2787 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 SNORD11-201ENST00000459124 84 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 snoU13.27-201ENST00000459278 104 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 OR9P1P-201ENST00000496431 281 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 MIR4298-201ENST00000584380 73 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 Pinc.1-201ENST00000616452 154 ntBASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC113Q9H0I3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 MIR522-201ENST00000385071 87 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 FTH1P12-201ENST00000432137 551 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 SNORA31.17-201ENST00000516953 127 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 AC087685.1-201ENST00000587507 141 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 AL021707.8-201ENST00000609428 183 ntBASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC113Q9H0I3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 SNORA16B-201ENST00000364674 135 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 MIR15B-201ENST00000385045 98 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 RNU2-55P-201ENST00000411146 174 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 RPL23AP6-201ENST00000446637 472 ntBASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC113Q9H0I3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
CCDC113Q9H0I3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 MIR221-201ENST00000385135 110 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 RNU6-360P-201ENST00000390944 104 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 SNRPGP8-201ENST00000454064 226 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 AC074198.2-201ENST00000508153 258 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 RNU7-149P-201ENST00000516739 59 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 MIR4662B-201ENST00000579498 81 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 AL773524.1-201ENST00000614065 229 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.46□□□□□ -2.02
CCDC113Q9H0I3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 SNORA70B-201ENST00000384210 135 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 RNU6-163P-201ENST00000384396 106 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 MIR548I3-201ENST00000408378 149 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 MIR548I1-201ENST00000408810 149 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 RNU2-70P-201ENST00000410718 179 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 RPL30P13-201ENST00000418873 348 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 RNU6-126P-201ENST00000516685 103 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CCDC113Q9H0I3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SNORD14E-201ENST00000364009 85 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SNORA26-201ENST00000391286 122 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms