Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 RPL30P15-201ENST00000457129 321 ntBASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 PRDX4P1-201ENST00000507189 574 ntBASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 RNU6-237P-201ENST00000515985 71 ntBASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 RNU7-116P-201ENST00000516940 62 ntBASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SLIRPQ9GZT3 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.646-201ENST00000410980 101 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 AC114737.2-201ENST00000421583 173 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 MTND1P2-201ENST00000430604 821 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 SNRPGP14-201ENST00000435400 219 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
SLIRPQ9GZT3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 RNU6-369P-201ENST00000362515 102 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 RNU6-396P-201ENST00000365369 105 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 SNORA36.2-201ENST00000384004 127 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 RNU6-855P-201ENST00000410395 104 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 RNU6-911P-201ENST00000516523 104 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 MIR4659A-201ENST00000580269 81 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 Pinc.1-201ENST00000616452 154 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
SLIRPQ9GZT3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RNU6-580P-201ENST00000365159 107 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RNU6-442P-201ENST00000383968 104 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RNU6-767P-201ENST00000384132 107 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RNU6-310P-201ENST00000384655 107 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.635-201ENST00000459041 101 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 RN7SKP295-201ENST00000517264 153 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AC012433.1-201ENST00000588916 398 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 POLR3GP1-201ENST00000594073 261 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AP003357.1-201ENST00000604497 148 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AC011476.5-201ENST00000615594 130 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AC098679.4-201ENST00000624241 654 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 TPTEP1-208ENST00000636884 213 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 AC073869.6-201ENST00000640656 341 ntBASIC0.31□□□□□ -2.36
SLIRPQ9GZT3 MIR377-201ENST00000362145 69 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 MIR573-201ENST00000384964 99 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 MT-TN-201ENST00000387400 73 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 U8.17-201ENST00000391292 132 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 AC092628.1-201ENST00000436250 252 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 MTND1P34-201ENST00000438556 671 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 RNU7-169P-201ENST00000459456 61 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 RNU6-470P-201ENST00000515954 104 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 MIR4714-201ENST00000580728 77 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 MIR5690-201ENST00000583739 73 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 RMST_2.1-201ENST00000617263 136 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 AC138305.3-201ENST00000624988 240 ntBASIC0.3□□□□□ -2.36
SLIRPQ9GZT3 RNU6-845P-201ENST00000362578 103 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 RNY3P11-201ENST00000364153 102 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 RNU6-268P-201ENST00000364174 107 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 MIR570-201ENST00000384917 97 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 RNU6-370P-201ENST00000411008 104 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 AC005042.3-201ENST00000453230 174 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 MTND4P17-201ENST00000470444 350 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 AC024405.2-202ENST00000532731 184 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 MIR5188-201ENST00000583467 113 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 MIR4298-201ENST00000584380 73 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 AC136443.5-201ENST00000603741 370 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 JPX_2.1-201ENST00000614161 69 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 U2.1-201ENST00000618978 145 ntBASIC0.29□□□□□ -2.36
SLIRPQ9GZT3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SLIRPQ9GZT3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.28□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.28□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.28□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.28□□□□□ -2.36
SLIRPQ9GZT3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 293.8 ms