Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 RNU6-264P-201ENST00000517134 104 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 AC240442.1-201ENST00000616055 283 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 AL669831.3-213ENST00000636676 183 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 RNU6-1084P-201ENST00000362498 107 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.160-201ENST00000363677 92 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.172-201ENST00000363765 102 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.248-201ENST00000364501 109 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 SNORD81.2-201ENST00000365153 76 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 MIR522-201ENST00000385071 87 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 RNU2-54P-201ENST00000410299 190 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.619-201ENST00000410951 90 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 AL035398.1-201ENST00000430869 322 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.691-201ENST00000516611 103 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 AC098679.4-201ENST00000624241 654 ntBASIC0.66□□□□□ -2.3
RPAP1Q9BWH6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
RPAP1Q9BWH6 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.433-201ENST00000384089 102 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.474-201ENST00000384341 102 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 MIR1185-1-201ENST00000408598 86 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.646-201ENST00000410980 101 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RNU2-61P-201ENST00000411069 191 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 MRPS18CP6-201ENST00000423587 223 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RPL30P15-201ENST00000457129 321 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RNU6-966P-201ENST00000516479 104 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 SNORD45.4-201ENST00000516629 73 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 SNORA18.7-201ENST00000516910 131 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 AC022616.4-201ENST00000522985 181 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 AC092794.1-201ENST00000612734 582 ntBASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPAP1Q9BWH6 RNU6-626P-201ENST00000363354 107 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 RNY3P11-201ENST00000364153 102 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 RNU6-310P-201ENST00000384655 107 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1199P-201ENST00000411249 104 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 MTND1P2-201ENST00000430604 821 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 FCF1P4-201ENST00000448326 183 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 MIR4764-201ENST00000580680 88 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 AC005972.2-201ENST00000604690 348 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 AC022306.2-201ENST00000617563 647 ntBASIC0.64□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1188P-201ENST00000363795 107 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 RNU6-324P-201ENST00000363957 106 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 RNU6-20P-201ENST00000384106 107 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.505-201ENST00000384489 102 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 MIR1197-201ENST00000408818 88 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AL390729.2-201ENST00000416137 156 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 MTCO3P10-201ENST00000455912 772 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 RNU6-436P-201ENST00000516171 114 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AC144568.1-201ENST00000520139 137 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AC005176.2-201ENST00000596933 147 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AL360085.1-201ENST00000604713 532 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 TPTEP1-208ENST00000636884 213 ntBASIC0.63□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.166-201ENST00000363730 102 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 SNORD14.1-201ENST00000365609 90 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.390-201ENST00000383932 102 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.446-201ENST00000384178 104 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 RNU6-708P-201ENST00000384217 107 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 RNU6-876P-201ENST00000391295 104 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 AC138305.3-201ENST00000624988 240 ntBASIC0.62□□□□□ -2.31
RPAP1Q9BWH6 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-890P-201ENST00000384121 107 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1297P-201ENST00000384415 104 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNY3P4-201ENST00000384428 101 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 SNORD89-201ENST00000390981 114 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 SNORA75.6-201ENST00000391318 127 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-370P-201ENST00000411008 104 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RBMX2P4-201ENST00000441256 376 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 CHEK2P4-201ENST00000450340 246 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU7-169P-201ENST00000459456 61 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 PRDX4P1-201ENST00000507189 574 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-155P-201ENST00000516347 100 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1012P-201ENST00000516606 109 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 MIR5690-201ENST00000583739 73 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms